| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2306 |
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| Symbol | |
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| ID | 5323167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2386055 |
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| End bp | 2386900 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791244 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327973 |
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| Protein GI | 150397506 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.542152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACTCC TGACTGAAAA CCCAATCCCG ATCGGCGCCT GGGCGAAGGC CTTTGTCGAC
TGGCTGACGA CGAATTTCGA CCTTTTCTTC GACCAGCTCG CCAATGTGCT TTCGGGCATC
ATTTCCGTCC TGCTCTACAT TCTCCAAACG CCGCATCCGC TCATCGTCAT CGCCATCGTG
ACGGCGCTGG CATGGTGGTT TCGCCGGTCC ATCGGCATTG CCGTTTTCAC CTGTCTCGGA
ATGCTGCTGA TCGTCAATCA GGGATACTGG CAGGAGACCA CGGAAACGCT GGCCCTGGTG
CTTGCGGCGA CCTTCGTCAG CATGGCCGTC GGGGTGCCGC TCGGTATAGC CGCCGCGCGC
CGCGCCTGGA TTTACTCGTT CATGCGCCCG ATCCTGGACC TGATGCAGAC GATCCCCACC
TTCGTCTACC TCATCCCGGC GCTGATTCTC TTCGGTCTCG GCATGGTACC CGGGCTGATC
GCCACCGTTA TCTTCGCCAT ACCCGCGCCA ATCCGGCTGA CGCGGCTCGG TATCATCTCG
ACACCGCCTG CGCTTGTGGA GGCCGCAGAA TCCTTCGGCG CCACGCCCTG GCAGGTGCTG
CGCAAGGTAG AACTTCCCTT CGCCATGCCG CAGATCATGG CGGGTCTCAC GCAGACGATC
ATGCTGTCCC TTTCGATGGT GGTGATCGCG GCGCTCGTCG GAGCCGACGG CCTCGGAGTG
CCGGTACTCA GGGCTCTGAA CACGGTGAAC ATCGCCAGGG GATTCGAGTC CGGCCTCTGC
ATCGTCATTC TTGCGATCGT CCTCGACCGC CTTTTCCGTT CGTCCGATGA AGGAGAAGGC
GCATGA
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| Protein sequence | MELLTENPIP IGAWAKAFVD WLTTNFDLFF DQLANVLSGI ISVLLYILQT PHPLIVIAIV
TALAWWFRRS IGIAVFTCLG MLLIVNQGYW QETTETLALV LAATFVSMAV GVPLGIAAAR
RAWIYSFMRP ILDLMQTIPT FVYLIPALIL FGLGMVPGLI ATVIFAIPAP IRLTRLGIIS
TPPALVEAAE SFGATPWQVL RKVELPFAMP QIMAGLTQTI MLSLSMVVIA ALVGADGLGV
PVLRALNTVN IARGFESGLC IVILAIVLDR LFRSSDEGEG A
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