| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2305 |
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| Symbol | |
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| ID | 5323166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2384946 |
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| End bp | 2385902 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791243 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001327972 |
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| Protein GI | 150397505 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.738548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.268073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAGGA CACTTTCTCG CGAATTCATG CTGGCAGGTG CCGTTTGCAT GGCAACCCTG
ACCGCCGGAC CCGCATTCGC GGCGGAGCCG GAAAGCTGCG GTACGGTCCG CTTCTCCGAC
GTCGGCTGGA CCGATATCAC AGCAACCACC GCGACCGCGA CGACCATCCT CGAAGCGCTC
GGTTACGAGA CGGACGTGAA GGTTCTGTCG GTGCCCGTTA CCTACACCTC GCTGAAGAAC
AAGGACATCG ACGTCTTTCT CGGCAACTGG ATGCCGACCA TGGAAGCGGA CATCGCCCCC
TATCGCGAAG ACAAGTCCGT CGAGACGGTA CGCGAGAACC TCGCAGGTGC GAAATACACG
CTTGCGACAA ATGCCAAGGG CGCGGAGCTC GGCATCAAGG ACTTCAAGGA TATCGCCGCG
CACAAGGAGG AGCTCGACGG CAAGATCTAC GGGATCGAGC CGGGCAATGA CGGCAACCGC
CTGATCATCG ACATGGTCGA AAAAGGCACT TTCGATCTCA AGGGCTTCGA AGTCGTCGAA
TCTTCCGAGC AGGGCATGCT CGCGCAGGTC GCCCGCGCTG AAAAATCCGG CGACCCGATC
GTTTTTCTCG GATGGGAGCC GCATCCGATG AACGCGAATT TCAAGCTCAC CTATCTATCC
GGTGGCGATG ACGTGTTCGG CCCCGACTAC GGTGGCGCCA CCGTGCATAC CAATGTGCGC
GCCGGCTACA CGACCGAATG CCCCAATGTC GGCAAGCTTC TCCAAAACCT CTCGTTTTCG
CTCCAGATGG AGAACGAGAT CATGGGCAAG ATCCTGAACG ATGGCGAAGA CCCGGAAAAG
GCTGCAGCTT CGTGGCTGAA GGACAATCCG CAAGCAATCG AACCGTGGCT TGCGGGGGTC
ACCACGAAGG ACGGCGGCGA TGGGCCGGCC GCCGTCAAGA GCGCGCTGGG CCTCTGA
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| Protein sequence | MIRTLSREFM LAGAVCMATL TAGPAFAAEP ESCGTVRFSD VGWTDITATT ATATTILEAL
GYETDVKVLS VPVTYTSLKN KDIDVFLGNW MPTMEADIAP YREDKSVETV RENLAGAKYT
LATNAKGAEL GIKDFKDIAA HKEELDGKIY GIEPGNDGNR LIIDMVEKGT FDLKGFEVVE
SSEQGMLAQV ARAEKSGDPI VFLGWEPHPM NANFKLTYLS GGDDVFGPDY GGATVHTNVR
AGYTTECPNV GKLLQNLSFS LQMENEIMGK ILNDGEDPEK AAASWLKDNP QAIEPWLAGV
TTKDGGDGPA AVKSALGL
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