| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2276 |
|---|
| Symbol | |
|---|
| ID | 5323137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2351558 |
|---|
| End bp | 2352478 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640791214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001327943 |
|---|
| Protein GI | 150397476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.227684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.998635 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCGA TCGGGCACAT CGTCGCGCGT ACCCCTTCCG GTGAGGTGCT GTCGCGCGCG
CAGCAGCGCG CAATGCTCGT GCCCGACTGT CTCGTCGAAG CGCGAAGGAT CGCCAATACG
GTGATCACCG GCTGGCACGG CCGCCGCAAG CGCGGCATCG GCGAGAATTT CTGGCAGTTC
CGCCCCTACA GCAATGGGGA GAGCCTGTCG CGAATCGACT GGCGCCGTTC CGCCAAGGAC
GACCACACCT ATGTCCGCGA CCGCGAATGG GAGGCAGCGC ATACGATCTG GCTCTGGGCC
GATCTCTCGC CCTCGATGAT GTACAAGTCA ACGCTGGGTG CCGTTTCGAA GGAGAGCCGC
GCCCTGGTCC TGATGCTGGC GCTCGCCGAA ATTCTCGCCC GCTCCGGCGA ACGGATCGGC
TGCCCGGGGG TGATGGAGCC GGTTTCGGCA CGCAACGCCG CCGAGCGGCT GGCAACCGCG
ATCATGCATA GCCCGCTGTC GGAGGGTTTG CCCGATACGG GAATGGTACG CGGTGCCAGC
GACCTGGTCC TGATCGGCGA TTTTCTTGAT CCCGCGGACA CGATAATGGA GCGACTTGGA
CCACTCGCCC GCAGAGGCCT GCGCGGCCAC GTCGTGGAAA TCGCCGACCC TGCCGAGGAA
GTCTTCCCCT ATGCCGGCAG GACCGAGTTC ACCGACCCTG AAACCGGTGA GAAGCTGACA
GCCGGGCGCG CCGAAATCCT GCGCGAGGAT TACCAGCGCG CCTATCGCGC TCGCCGCGAA
AGTCTCGGCA CGAGCCTGCG CCATCTCGGC TGGACCTTTA TTCCGCACAG GACGGATCGG
GCGGCATCGG AAGCTTTGGT CGCGGTGCAT ATGTATCTTT CCGGCATGCC GGGCCGAGTT
ACACATGGAG GGGTCTCATG A
|
|---|
| Protein sequence | MASIGHIVAR TPSGEVLSRA QQRAMLVPDC LVEARRIANT VITGWHGRRK RGIGENFWQF
RPYSNGESLS RIDWRRSAKD DHTYVRDREW EAAHTIWLWA DLSPSMMYKS TLGAVSKESR
ALVLMLALAE ILARSGERIG CPGVMEPVSA RNAAERLATA IMHSPLSEGL PDTGMVRGAS
DLVLIGDFLD PADTIMERLG PLARRGLRGH VVEIADPAEE VFPYAGRTEF TDPETGEKLT
AGRAEILRED YQRAYRARRE SLGTSLRHLG WTFIPHRTDR AASEALVAVH MYLSGMPGRV
THGGVS
|
|---|
| |