Gene Smed_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2269 
Symbol 
ID5323130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2346244 
End bp2346714 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content63% 
IMG OID640791207 
Productdehydratase 
Protein accessionYP_001327936 
Protein GI150397469 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.265677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.623305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGC TGGAGGAACT CTACCAGACC GGGCGCAAGG TCGTCACCGG CAGCCTGACC 
TTCACCGCCG AGGACATCAT TCGCTTTGCC CGCAATTTCG ACCCGCAGCC CTTCCACGTC
GACGAGGAGC AGGCGAGACA TTCGCTTTTC GGCCGTCTTT GCGCCTCCGG CTGGCATACC
AGCGCCGGCT GGATGCAGTG CTTCCTGAGG TTCTGGAAGG AGGAGGCCCG CCGCCTCGCA
GCGGAGGGAC TGCACGCGCC GAAGCTCGGG CCCTCGCCCG GATTCAAGGA ACTCCGATGG
CTGAAGCCGG TCTATGCCGG CGACACGATC ACTTACGCGG TCACTTTGCT GGAAGCCCGG
ATCGTCGCCT CTCGCCCCGG CTGGCGGATC AACACTATCC TCTGCGAGGG CGAGAACCAG
CATGGCGAGC CGGTTATCCG CTTCGAGAGC AAGGTCATTG AATTTGCTTG A
 
Protein sequence
MMTLEELYQT GRKVVTGSLT FTAEDIIRFA RNFDPQPFHV DEEQARHSLF GRLCASGWHT 
SAGWMQCFLR FWKEEARRLA AEGLHAPKLG PSPGFKELRW LKPVYAGDTI TYAVTLLEAR
IVASRPGWRI NTILCEGENQ HGEPVIRFES KVIEFA