| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2257 |
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| Symbol | |
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| ID | 5323118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2334452 |
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| End bp | 2335384 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791195 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001327924 |
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| Protein GI | 150397457 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.441991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.889784 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTTT TCGCAGGCAA TTCGAACCGG CTGCTGGCCG AAGCGATCTG CAACTATCTC
AACCTGCCGC TCGGCAAAGC CACAGTAAGG CGCTTCGCCG ATCAGGAAAT CTTCGTCGAA
ATCGGCGAGA ACGTGCGCGG CGAGGACGTC TTCATCGTCC AGTCGACGTC CTTCCCAACG
AACGATCATC TGATGGAACT CCTCATCATG ATCGACGCGG TCCGCCGTTC CTCCGCCCGC
CGCATCACTG CCGTGCTTCC TTATTTCGGC TATGCCCGGC AGGACCGCAA ACCCGGCCCC
CGCACACCCA TATCCGCCAA GCTGGTCGCC AATCTCATCA CCGAAGCCGG CGCCGACCGC
GTTCTGACCC TCGATCTTCA CGCTGGGCAG ATCCAGGGCT TCTTCGATAT TCCGACCGAC
AACCTCTACG CCATTCCGAT CCTCGCGCGC GACGTGAAGG AGAACTACAA TCTCAAGAAT
GTCATGGTCG TTTCGCCCGA TGTGGGCGGC GTGGTACGTG CCCGGGCGCT TGCCAAACGA
CTGGACTGTC TGCTTGCGAT CGTCGACAAG CGCCGCGACC GGCCCGGTGA ATCCGAGGTC
ATGAACGTCA TCGGCGAAGT CAACGGCAAG GACTGCCTCC TCATCGACGA TATCGTCGAT
TCCGGCGGTA CGCTCTGCAA CGCCGCCGAG GCCTTGCTGA AGAACGGTGC GACCAGTGTC
ACCGCCTACA TCACCCATGG CGTGCTCTCG GGGGGCGCAG TCGCCCGGGT CACGTCCTCG
ATGCTGAAAG AACTGGTGAT CACCGACTCG ATCCAGCCGA CGACGGCGGT CCAGTCGGCG
CACAACGTCC GCGTCATCTC GACCGCAGCA CTGCTCGGCG AAGCGATTAG CCGCACGAGC
CAGGAAGAAT CGGTTTCGAG CCTGTTCGAC TGA
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| Protein sequence | MKVFAGNSNR LLAEAICNYL NLPLGKATVR RFADQEIFVE IGENVRGEDV FIVQSTSFPT
NDHLMELLIM IDAVRRSSAR RITAVLPYFG YARQDRKPGP RTPISAKLVA NLITEAGADR
VLTLDLHAGQ IQGFFDIPTD NLYAIPILAR DVKENYNLKN VMVVSPDVGG VVRARALAKR
LDCLLAIVDK RRDRPGESEV MNVIGEVNGK DCLLIDDIVD SGGTLCNAAE ALLKNGATSV
TAYITHGVLS GGAVARVTSS MLKELVITDS IQPTTAVQSA HNVRVISTAA LLGEAISRTS
QEESVSSLFD
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