Gene Smed_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2252 
Symbol 
ID5323113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2328999 
End bp2329841 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID640791190 
Productprolipoprotein diacylglyceryl transferase 
Protein accessionYP_001327919 
Protein GI150397452 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0682] Prolipoprotein diacylglyceryltransferase 
TIGRFAM ID[TIGR00544] prolipoprotein diacylglyceryl transferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.936253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAACCA TCGCGACCCG CCTCGCCATT CTCCCCTTCC CCGAAATCGA CCCCGTGATC 
TTCACGATCG GGCCGCTCGC GGTGCGCTGG TACGGCCTCG CCTATGTAGT GGGTATCCTC
CTCGGGTGGT TCTATGCGCG CCGCATCGTC CAGAACGCCG CCCTCTGGCG CAACGGAACC
CCCGCCTGCA ACCTGACGCA ACTTGACGAT TTCCTGCTCT GGGCCGCCGG CGGCATCGTG
CTCGGGGGAC GCATCGGCTA CATACTCTTC TACGATCTCG GCTCCATCCT CGACGACCCC
CTCCGCGCGA TCCAGATCTG GAACGGCGGC ATGTCCTTTC ACGGCGGTCT TGTGGGCACG
ACCCTGGCGA TGATCATCTT TGCGCGTAGA AACGCGATCC CCATCTGGAG CCTGTTCGAC
GTGGTGGCTG CCGTGGTGCC TATCGGACTT TTCTTTGGCC GCATCGCCAA TTTCATCAAT
GGAGAACTCT GGGGCCGCCT GTCTTCTGTG CCCTGGGCGG TCGTCTTCCC GACGGGAGGG
CCCTTTGCAC GCCATCCGAG CCAGCTCTAC GAGGCCGCTC TCGAGGGCCT GGTTCTTCTC
GCCGTCCTCG CCTGGTTCGT CTATCGCCGC AAAGCTTTGA AAATCCCCGG CCTCGTCACC
GGCATATTCG TCTGCGGCTA TGCCGCAAGC CGCATTTTCG TGGAGTTCTT CCGCGAACCG
GATGCACAGA TCGGCTATCT TGCCGGGGAC TGGCTCACTA TGGGCATGGT GCTTTCAGTG
CCGATGGCGC TTATAGGAAT CTGGGCCATT GCGCGGGCGC GCAGCGCTGC CGCCGCCGCT
TGA
 
Protein sequence
METIATRLAI LPFPEIDPVI FTIGPLAVRW YGLAYVVGIL LGWFYARRIV QNAALWRNGT 
PACNLTQLDD FLLWAAGGIV LGGRIGYILF YDLGSILDDP LRAIQIWNGG MSFHGGLVGT
TLAMIIFARR NAIPIWSLFD VVAAVVPIGL FFGRIANFIN GELWGRLSSV PWAVVFPTGG
PFARHPSQLY EAALEGLVLL AVLAWFVYRR KALKIPGLVT GIFVCGYAAS RIFVEFFREP
DAQIGYLAGD WLTMGMVLSV PMALIGIWAI ARARSAAAAA