Gene Smed_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2244 
Symbol 
ID5323105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2322086 
End bp2322568 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content60% 
IMG OID640791182 
ProductMarR family transcriptional regulator 
Protein accessionYP_001327911 
Protein GI150397444 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.402427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCC AGACCAAGAA CAAGAGCCTG GGCATAAACA ATGACCCGGA GGACGATGAG 
GGCACGATCG ATTTCGAGAT CATCGAACTG CTCTTTTTCG CCTATCGCGA CTTCACCGGC
GATCCGGACG CCATTCTCGA GAAGAGCGGA TTTGGCCGCG CGCACCATCG CGTCGTGCAT
TTCGTCAACC GCGAACCGGG AATGACCGTC GCTGACCTCC TCGACACTTT GAAGATCACC
AAGCAGAGCC TGGCCCGCGT GCTCAAACAG TTGATCGATT CCGGCTATAT CCGGCAGGTG
ACCGGTCCCG AAGACCGGCG TCAACGCATG CTTTACACGA CAACCGAGGG CCGGGCCTTG
GCGCGAGCCC TTGCCGAGCC ACAGTCCCGC CGCATAGCGG ATGCATTGGC AAAGGCGGGA
CCGGGCGCAC GGGAAACGGT GAAGCGCTTT CTGGCAAATA TGATGAACGA CACTGTGGGC
TGA
 
Protein sequence
MAGQTKNKSL GINNDPEDDE GTIDFEIIEL LFFAYRDFTG DPDAILEKSG FGRAHHRVVH 
FVNREPGMTV ADLLDTLKIT KQSLARVLKQ LIDSGYIRQV TGPEDRRQRM LYTTTEGRAL
ARALAEPQSR RIADALAKAG PGARETVKRF LANMMNDTVG