Gene Smed_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2240 
Symbol 
ID5323101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2319581 
End bp2320222 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content61% 
IMG OID640791178 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001327907 
Protein GI150397440 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAGG CAGGCATCAT TCCGGTGACG CATTTCGAAC AGAACTGTAC CGTCCTGTTC 
GATAGCGAAA GCAAGGAGGG GGTGGTGGTC GATCCTGGCG GCGACGTCGA CATCATTCTG
CAGACGGTCC GCGAGAACGG CATCCTGTTG AAGGCAATCT GGCTCACCCA CGGCCATATC
GATCACGCCG GTGGCGCCAA GGAGTTGAAA GAAGCGCTAG GCCTGGAGAT TGTCGGGCCA
CACAAGGCCG ACCTGCCGCT GCTCGAAAGG CTGGAGGATC AGGCGGAGCG CTTCGGTCTC
GCCATGAAGG TCCAGAACGT CGTTCCGGAT CGATGGCTGG AAGACGGTGA TACCGTCTCC
TTCGGCGACC ACCTCTTCGA GGTCTTGCAC TGCCCGGGAC ACGCGCCCGG CCACGTGGTC
TATTTCAACC GGGCACAGAA ATTCGCGCAT GTCGGCGACG TGCTCTTTCA CGGTTCGATC
GGCCGCACCG ACCTGCCGGG CGGCAATCAT CAGCAGCTTC TGGATTCGAT ACGCGACAAG
ATCCTGCCGC TCGGGGATGA AGTGGGCTTC ATCTGCGGCC ATGGCCCAGG GGGGCAGGTC
GGTGAAGAGC GCCGTAGCAA TCCCTTTTTG CGCGGTCTCT GA
 
Protein sequence
MLQAGIIPVT HFEQNCTVLF DSESKEGVVV DPGGDVDIIL QTVRENGILL KAIWLTHGHI 
DHAGGAKELK EALGLEIVGP HKADLPLLER LEDQAERFGL AMKVQNVVPD RWLEDGDTVS
FGDHLFEVLH CPGHAPGHVV YFNRAQKFAH VGDVLFHGSI GRTDLPGGNH QQLLDSIRDK
ILPLGDEVGF ICGHGPGGQV GEERRSNPFL RGL