| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2224 |
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| Symbol | tdh |
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| ID | 5323085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2302218 |
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| End bp | 2303252 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791162 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001327891 |
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| Protein GI | 150397424 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATA TGATGAGGGC ACTCGTAAAG ACCAGGCCCG AGGTGGGGCT CTGGATGGAG
CGGGTGCCGG TCCCGGAAGT CGGGCCGAAT GATGTTCTGA TCCGCGTCAG GAAATCGGCG
ATCTGCGGCA CCGATGTCCA TATCTGGAAC TGGGATCAAT GGGCGCAGAA AACGATTCCC
GTGCCGATGG TCGTCGGGCA CGAATTCATG GGCGAAATCG TCGAGGTCGG GCCGGCCGTG
ACGAAGCATC ATGTCGGCGA GCGGGTTTCC GGAGAGGGCC ACATCGTTTG CGGCAAGTGC
CGCAATTGCC GCGCCGGCAG GGGGCATCTC TGCCGCAACA CCCTCGGCGT CGGCGTCAAC
CGTCCCGGCT CCTTCGCCGA ATTCGTGTGT CTGCCGGAAT ATAATGTCGT GTCGATCCCG
GACGACGTTC CCGACGAGAT CGCCGCGATC TTCGATCCCT TCGGCAACGC TGTGCACACA
GCGCTCTCCT TCGATCTCGT CGGCGAAGAC GTGCTTGTCA CCGGCGCTGG GCCGATCGGC
ATCATGGGGG CTTTGGTTGC CAAGCGGTGC GGTGCCCGCA AGGTCGTGAT CACCGACATC
AATCCGGTCC GCCTCGATCT CGCGCGCAAG GTCGGTATCG ACTATGTCGT CGACGCATCG
AAGGAAAATC TCGCCGATGT GATGCGGGTG ATCGGCATGA CCGAGGGCTT CGATGTCGGC
CTGGAAATGT CGGGTGCCGC ACCCGCCTTT CGCGACATGA TCGACAAGAT GAACAATGGC
GGCAAGATCG CAATCCTCGG CATTGCGCCG GCGGGCTTCG AAATCGACTG GAACAAGGTG
ATCTTCAAGA TGCTCAATCT GAAGGGCATC TATGGTCGAG AGATGTTCGA GACCTGGTAC
AAGATGATCG CCTTCGTCCA GGGCGGGCTT GACCTTTCAC AGATAATCAC GCACCGCATC
GGCATCGACG AGTTTGGTGA CGGCTTCGAA GCGATGCGCT CTGGCAATTC CGGCAAGGTC
GTGATGGACT GGTAG
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| Protein sequence | MTNMMRALVK TRPEVGLWME RVPVPEVGPN DVLIRVRKSA ICGTDVHIWN WDQWAQKTIP
VPMVVGHEFM GEIVEVGPAV TKHHVGERVS GEGHIVCGKC RNCRAGRGHL CRNTLGVGVN
RPGSFAEFVC LPEYNVVSIP DDVPDEIAAI FDPFGNAVHT ALSFDLVGED VLVTGAGPIG
IMGALVAKRC GARKVVITDI NPVRLDLARK VGIDYVVDAS KENLADVMRV IGMTEGFDVG
LEMSGAAPAF RDMIDKMNNG GKIAILGIAP AGFEIDWNKV IFKMLNLKGI YGREMFETWY
KMIAFVQGGL DLSQIITHRI GIDEFGDGFE AMRSGNSGKV VMDW
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