Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2216 |
Symbol | |
ID | 5323077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2295456 |
End bp | 2296250 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791154 |
Product | hypothetical protein |
Protein accession | YP_001327883 |
Protein GI | 150397416 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.402013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.52328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCTA CACGCATTGC CCGCACCGTA CATGTCGCAG CAGTTGCAGC CGCATTTGCT GGGGCCTTCG CGGCGGCAGC AGCCGCTCAA GACAGTGCCG CCGGCAAGGA TGGCAAGGGA GACGGAAAGG GGCGTCCGGA TGCCGTCCGG GGCCGCCAGG CGGTCATCAA GGTTTCCGGG GAAGGCCGTT CGACGACTGC GCCGGACATG GCGGTTCTGC AGCTCAGCGT AGTCAAAGAC GCAAAAACGG CGCGCGAGGC GCTCGATGCC AACAACAAGG CGATGGCGGA CGTGCTCTCG GCATTGAAGC AGGCCGGGAT CGCCGAGCGC GACCTTCAGA CGAGCGGCTT TTCGATCAAT CCGCAATATC ACTATCCTCA GAACAATGAC GGCGGTAATC GGCCACCGGA ACTGGTGGGC TACCAGGTCG TCAACGGCGT CGGTGTTCGC GTGCGGGATC TGGGGCAGCT CGGCGAGATC CTCGACAAAT CCGTAAGCCT CGGCGTCAAT CAGGGCGGCG GCATCGAGTT CACCAACGAC AAGCCGGAAG CCGTGATCAC GGAGGCCCGC AAGGCCGCGG TCGCCGATGC AATCAACAAG GCAAGGGTTC TGGCAGAGGC GGCCGGCGTC TCGCTCGGCC GTCTGATTGA AATTTCGGAA CAGCCCTCCC GGCCCGAGCC GATTCCCGTC GTGCGAAGCA TGGCCAAGGA ATTTGCCGCC GATTCGGTTC CCATCGCAAC GGGCGAGAAT GCCTACAACG TCAACGTCAA CGTGACATTC GCCATCGACC AGTAG
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Protein sequence | MSSTRIARTV HVAAVAAAFA GAFAAAAAAQ DSAAGKDGKG DGKGRPDAVR GRQAVIKVSG EGRSTTAPDM AVLQLSVVKD AKTAREALDA NNKAMADVLS ALKQAGIAER DLQTSGFSIN PQYHYPQNND GGNRPPELVG YQVVNGVGVR VRDLGQLGEI LDKSVSLGVN QGGGIEFTND KPEAVITEAR KAAVADAINK ARVLAEAAGV SLGRLIEISE QPSRPEPIPV VRSMAKEFAA DSVPIATGEN AYNVNVNVTF AIDQ
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