Gene Smed_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2216 
Symbol 
ID5323077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2295456 
End bp2296250 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID640791154 
Producthypothetical protein 
Protein accessionYP_001327883 
Protein GI150397416 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.402013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.52328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCTA CACGCATTGC CCGCACCGTA CATGTCGCAG CAGTTGCAGC CGCATTTGCT 
GGGGCCTTCG CGGCGGCAGC AGCCGCTCAA GACAGTGCCG CCGGCAAGGA TGGCAAGGGA
GACGGAAAGG GGCGTCCGGA TGCCGTCCGG GGCCGCCAGG CGGTCATCAA GGTTTCCGGG
GAAGGCCGTT CGACGACTGC GCCGGACATG GCGGTTCTGC AGCTCAGCGT AGTCAAAGAC
GCAAAAACGG CGCGCGAGGC GCTCGATGCC AACAACAAGG CGATGGCGGA CGTGCTCTCG
GCATTGAAGC AGGCCGGGAT CGCCGAGCGC GACCTTCAGA CGAGCGGCTT TTCGATCAAT
CCGCAATATC ACTATCCTCA GAACAATGAC GGCGGTAATC GGCCACCGGA ACTGGTGGGC
TACCAGGTCG TCAACGGCGT CGGTGTTCGC GTGCGGGATC TGGGGCAGCT CGGCGAGATC
CTCGACAAAT CCGTAAGCCT CGGCGTCAAT CAGGGCGGCG GCATCGAGTT CACCAACGAC
AAGCCGGAAG CCGTGATCAC GGAGGCCCGC AAGGCCGCGG TCGCCGATGC AATCAACAAG
GCAAGGGTTC TGGCAGAGGC GGCCGGCGTC TCGCTCGGCC GTCTGATTGA AATTTCGGAA
CAGCCCTCCC GGCCCGAGCC GATTCCCGTC GTGCGAAGCA TGGCCAAGGA ATTTGCCGCC
GATTCGGTTC CCATCGCAAC GGGCGAGAAT GCCTACAACG TCAACGTCAA CGTGACATTC
GCCATCGACC AGTAG
 
Protein sequence
MSSTRIARTV HVAAVAAAFA GAFAAAAAAQ DSAAGKDGKG DGKGRPDAVR GRQAVIKVSG 
EGRSTTAPDM AVLQLSVVKD AKTAREALDA NNKAMADVLS ALKQAGIAER DLQTSGFSIN
PQYHYPQNND GGNRPPELVG YQVVNGVGVR VRDLGQLGEI LDKSVSLGVN QGGGIEFTND
KPEAVITEAR KAAVADAINK ARVLAEAAGV SLGRLIEISE QPSRPEPIPV VRSMAKEFAA
DSVPIATGEN AYNVNVNVTF AIDQ