Gene Smed_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2211 
Symbol 
ID5323071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2290220 
End bp2291434 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID640791148 
Producthypothetical protein 
Protein accessionYP_001327878 
Protein GI150397411 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.471647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.108179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGCT TCGCTGTCGG CAGTCCTGCA GACACGCGCA ATGCTTATTC CGATCGCGTT 
CTGAGCCCGG AAGAGACGTT CGACCGTGTC CGGCCACTGC TTTCCCGGTT CGGCGTGACC
CGCATCGCAC GGCACACGGG CCTCGACAGG ATCGGGCTCC CGGTCTGGTG CGCCTACACG
CCGAACGCAC GATCGATCGC GGTTGCGCAG GGCAAGGGAT TGACGGATCC GGAGGCGAAG
GTTTCCGCGG TCATGGAGGC GCTGGAGCGC GCCGTTGCCT GCGAGCCCGC CGTCGGAACA
ATGGTCGCCA CGGCCCGGAC CTTGCGTGCA TCCGGACGGA CCGTGGAGCT GCTTCCCTGC
CTGATTGCGG CCGGGCAGCA GGATATAGGG CCGGACGAAG AACTCGCATG GGCCCTCGGC
TCCGACCTGA TCTCCGGCCG CGAGATACTC GTGCCGCTCG CAGCGGCGCT GCTCGACCGT
ACCCTGCATT CGCGTTTCTG GATGTCGTCG GATGGACTTG CGTCGGGAAA CGTCGTGGAA
GAAGCGATAT TGCACGGACT GCTGGAGCGC ATCGAGCGAG ACGCGCACGT CCTCTGGGGC
ATCTCGGGGC GGGAGCACCG TTACGGGTGC TGTGTCGCTC CCGAGAGCCT GGGCGATGCA
GCGTTGAACG GTCTCGTTGA GCGCATTGGG GCCGCCGGAC TCGATCTCCG GCTTTTCGAA
ATCACCAGCG ACATAGGCAT TCCCTGTTTC CTGGCGCTGC TCGGCCCACC CGATATCGCG
ACCAGGGGCG GTGGCCGCTT CGTCGAAGTG ACGAGCGGCT GCGGCGCACA TGTTTTTCCC
GCCCGGGCGG CGATCAGGGC GGTGACAGAA GCGGCGCAGT CCCGGCTCAC CTTCATCAGT
GGTGCCCGGG ACGATGTCTT TCCCGAGACC TTCAACCGGC CCTTGCCGGA ACTGACGCGG
CAGGCCTTCC TCGCCGAGCC ATCCAGACGG GCCATCGCCA GCCCGCAGGT CGGCGGAAGC
CTTGAAGCGC TGCTGCGCCA CACCGTTGAT CACCTGACGA GCGCCGGCGT GCAATCTGCA
ATTGCGCTTC GTCTGTCGGC GAACGCGCTT CCGTTCTCGG TCGTCAAGAT CTTCGTTCCC
AAACTCGAGA ATCCGGATGG TGATCGAGCG CGCCGTTTTG GTCCGCGTGC ACTATCCAAA
GCGCTCGCAT CGTGA
 
Protein sequence
MIGFAVGSPA DTRNAYSDRV LSPEETFDRV RPLLSRFGVT RIARHTGLDR IGLPVWCAYT 
PNARSIAVAQ GKGLTDPEAK VSAVMEALER AVACEPAVGT MVATARTLRA SGRTVELLPC
LIAAGQQDIG PDEELAWALG SDLISGREIL VPLAAALLDR TLHSRFWMSS DGLASGNVVE
EAILHGLLER IERDAHVLWG ISGREHRYGC CVAPESLGDA ALNGLVERIG AAGLDLRLFE
ITSDIGIPCF LALLGPPDIA TRGGGRFVEV TSGCGAHVFP ARAAIRAVTE AAQSRLTFIS
GARDDVFPET FNRPLPELTR QAFLAEPSRR AIASPQVGGS LEALLRHTVD HLTSAGVQSA
IALRLSANAL PFSVVKIFVP KLENPDGDRA RRFGPRALSK ALAS