Gene Smed_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2208 
Symbol 
ID5323068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2287417 
End bp2288730 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content65% 
IMG OID640791145 
Producthypothetical protein 
Protein accessionYP_001327875 
Protein GI150397408 
COG category[S] Function unknown 
COG ID[COG5368] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.220762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCC ACAGCCGCAC ATCGGATATC GCCTGCATCG ACGGGCTGCA GCGCGCCGCC 
TTCGAATACT TTCTTCGGTA TTCGGACATG CGAAGCGGCC TCGTCGCCGA CACGTCTCGC
GCGGGTTCTC CGTCGAGCAT CGCCGCCACG GGTTTCGGAC TTGCGGCCTA TCCGGTCGCG
GTCGAACGCG GCTGGATCGC CCGGTCGGAC GCTGCCTGGC GCGTGCTGAC CACCCTCCGG
TTTTTCGCGG CAAGCCGTCA GGGGAGCGAT GCGAGCGCGA CCGGTTATCG CGGATTCTAC
TACCATTTCC TCGACATGCG GACGGGGGAT CGCGTCTGGC GCAGTGAGCT CTCCACGATC
GACACCAGCC TGCTCCTCGC CGGTGCCTTG ACGGCGGCAG CTTATTTCTC TGGCCGCAGC
GAAGAGGAGA GTGAGCTCAG GCGGCTTGCG GCGCTCCTCT ACGAGAGGGC GGATTGGTAC
TGGGCGCTGA ATGGCGGCGA CACGGTCACG ATGGGGTGGC GCCCGCCGGG GCGATTTTTG
AAACACCGCT GGCGGGGTCA TAGCGAGGCG CTGCTCCTCT ACGTCCTGGC ACTCGGCTCG
CCCACGCGCC CGATCATGCC GCCGAACTAC GAGGCCTACA CGGCAGCGCA TGAGTGGCTG
GAACTCGATG GGGCGGCGCA TCTCCATGCC GCCGCGCTCT TCGTCCACCT TTTTCCGCAG
GCATGGATCG ATTTTCGCAG CATCCGGGAT AAGGGGATGC GCGACAGGGC CACCGACTAT
TTCGATAACA CCCGCCGCGC CATCCGGCTG CAGCGCGCCC ATGCCGAGGA AAACCCTCAT
GGATTCGCCG GCTATTGCCG CGACCTCTGG GGTTTCAGCG CCTGTCATGC GCCGAAAGGC
TGGTTTCGGC TTCGCGACGG CCGGCGGCAG AAGTTGCTGG GCTACGAGGC ACGCGGCGCA
CCGTTTGGTG CCGACGACGG AACACTCGTT CCCTGGGCGC CGCTGGCCGG GCTGCCATTC
GAACCGGACG CGTGTCTCGG CAGTCTTTTT CATCTGATGT CGCGTTACCC CGCCCTGGTG
AAGGAGGAAC GCCTTCCCGG CGGTTTCAAT CCCAGCCTGC CGGGGGACGG TCCCGAGGGA
TGGATGGACG ATAGACTCGT CGGCCTTGAC CAAGGGCTCG TCGTCATGAT GATCGAGAAT
TGGAGGAGCG GCCTGGTTTG GGAACTGACG CGCGGCATTC CGGCCTTTCG TCAGGGGTTG
AGCAGGGCTG GATTTGCGGG AGGCTGGCTT TCGTCGACGC TGCTTCAAGT CTGA
 
Protein sequence
MSLHSRTSDI ACIDGLQRAA FEYFLRYSDM RSGLVADTSR AGSPSSIAAT GFGLAAYPVA 
VERGWIARSD AAWRVLTTLR FFAASRQGSD ASATGYRGFY YHFLDMRTGD RVWRSELSTI
DTSLLLAGAL TAAAYFSGRS EEESELRRLA ALLYERADWY WALNGGDTVT MGWRPPGRFL
KHRWRGHSEA LLLYVLALGS PTRPIMPPNY EAYTAAHEWL ELDGAAHLHA AALFVHLFPQ
AWIDFRSIRD KGMRDRATDY FDNTRRAIRL QRAHAEENPH GFAGYCRDLW GFSACHAPKG
WFRLRDGRRQ KLLGYEARGA PFGADDGTLV PWAPLAGLPF EPDACLGSLF HLMSRYPALV
KEERLPGGFN PSLPGDGPEG WMDDRLVGLD QGLVVMMIEN WRSGLVWELT RGIPAFRQGL
SRAGFAGGWL SSTLLQV