Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2208 |
Symbol | |
ID | 5323068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2287417 |
End bp | 2288730 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791145 |
Product | hypothetical protein |
Protein accession | YP_001327875 |
Protein GI | 150397408 |
COG category | [S] Function unknown |
COG ID | [COG5368] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.220762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTCC ACAGCCGCAC ATCGGATATC GCCTGCATCG ACGGGCTGCA GCGCGCCGCC TTCGAATACT TTCTTCGGTA TTCGGACATG CGAAGCGGCC TCGTCGCCGA CACGTCTCGC GCGGGTTCTC CGTCGAGCAT CGCCGCCACG GGTTTCGGAC TTGCGGCCTA TCCGGTCGCG GTCGAACGCG GCTGGATCGC CCGGTCGGAC GCTGCCTGGC GCGTGCTGAC CACCCTCCGG TTTTTCGCGG CAAGCCGTCA GGGGAGCGAT GCGAGCGCGA CCGGTTATCG CGGATTCTAC TACCATTTCC TCGACATGCG GACGGGGGAT CGCGTCTGGC GCAGTGAGCT CTCCACGATC GACACCAGCC TGCTCCTCGC CGGTGCCTTG ACGGCGGCAG CTTATTTCTC TGGCCGCAGC GAAGAGGAGA GTGAGCTCAG GCGGCTTGCG GCGCTCCTCT ACGAGAGGGC GGATTGGTAC TGGGCGCTGA ATGGCGGCGA CACGGTCACG ATGGGGTGGC GCCCGCCGGG GCGATTTTTG AAACACCGCT GGCGGGGTCA TAGCGAGGCG CTGCTCCTCT ACGTCCTGGC ACTCGGCTCG CCCACGCGCC CGATCATGCC GCCGAACTAC GAGGCCTACA CGGCAGCGCA TGAGTGGCTG GAACTCGATG GGGCGGCGCA TCTCCATGCC GCCGCGCTCT TCGTCCACCT TTTTCCGCAG GCATGGATCG ATTTTCGCAG CATCCGGGAT AAGGGGATGC GCGACAGGGC CACCGACTAT TTCGATAACA CCCGCCGCGC CATCCGGCTG CAGCGCGCCC ATGCCGAGGA AAACCCTCAT GGATTCGCCG GCTATTGCCG CGACCTCTGG GGTTTCAGCG CCTGTCATGC GCCGAAAGGC TGGTTTCGGC TTCGCGACGG CCGGCGGCAG AAGTTGCTGG GCTACGAGGC ACGCGGCGCA CCGTTTGGTG CCGACGACGG AACACTCGTT CCCTGGGCGC CGCTGGCCGG GCTGCCATTC GAACCGGACG CGTGTCTCGG CAGTCTTTTT CATCTGATGT CGCGTTACCC CGCCCTGGTG AAGGAGGAAC GCCTTCCCGG CGGTTTCAAT CCCAGCCTGC CGGGGGACGG TCCCGAGGGA TGGATGGACG ATAGACTCGT CGGCCTTGAC CAAGGGCTCG TCGTCATGAT GATCGAGAAT TGGAGGAGCG GCCTGGTTTG GGAACTGACG CGCGGCATTC CGGCCTTTCG TCAGGGGTTG AGCAGGGCTG GATTTGCGGG AGGCTGGCTT TCGTCGACGC TGCTTCAAGT CTGA
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Protein sequence | MSLHSRTSDI ACIDGLQRAA FEYFLRYSDM RSGLVADTSR AGSPSSIAAT GFGLAAYPVA VERGWIARSD AAWRVLTTLR FFAASRQGSD ASATGYRGFY YHFLDMRTGD RVWRSELSTI DTSLLLAGAL TAAAYFSGRS EEESELRRLA ALLYERADWY WALNGGDTVT MGWRPPGRFL KHRWRGHSEA LLLYVLALGS PTRPIMPPNY EAYTAAHEWL ELDGAAHLHA AALFVHLFPQ AWIDFRSIRD KGMRDRATDY FDNTRRAIRL QRAHAEENPH GFAGYCRDLW GFSACHAPKG WFRLRDGRRQ KLLGYEARGA PFGADDGTLV PWAPLAGLPF EPDACLGSLF HLMSRYPALV KEERLPGGFN PSLPGDGPEG WMDDRLVGLD QGLVVMMIEN WRSGLVWELT RGIPAFRQGL SRAGFAGGWL SSTLLQV
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