Gene Smed_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2205 
Symbol 
ID5323065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2285391 
End bp2285999 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content61% 
IMG OID640791142 
ProductTetR family transcriptional regulator 
Protein accessionYP_001327872 
Protein GI150397405 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.270822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGA CACAAAACAC ACGCGAACGT ATCGTTTCCG CCGCTGCCAG GCTGTTCTAT 
GCGGAAGGAA TTCGCGCCGT CAGCGTGGAC GCCGTTGCCG AGGCGGCCGG CTTGACGAAG
CGCACTCTCT ACTATCATTT CAAGAGCAAG GACGAGTTGA TTGCCGCCTA TCTTGAGGAG
CGTGACCAGC CCAACCTCAA GCTCTTCCAG AAGTGGTTCA GCGAAACCGA CGGTGATGCG
GCGTCAAAGA TCAAAGCCAT TTTTCTCAAT CTCGCCCGGG CTGCCCGGCA CCCGAAATGG
AAGGGCTGCG GTTTCCTCCG CACTTCGGCG GAACTCGCCA ATATGCCCGG CCACCCGGCG
ATCCGCATAG CGGCAGCGCA CAAAAGGAAG TTCGAGGACT GGCTGCGTCA GAGCTTCGAG
ACGGAAGGAA TTGCAGAGGC GGCCAGGCTC GCGCGGCAGA TGCTGCTGCT CCTCGACGGC
AGCTTCGCGG TCGTTTTGCT CCACCGTGAT CCGAGCTATA TGGAGACGGC GGGCGAGGCC
GCGGCTACGC TCGTAAAGCT GGCGCTTTCG GAACCGAGTG TGCAGCAACC AGCCGGGAGG
GGCAAATGA
 
Protein sequence
MAATQNTRER IVSAAARLFY AEGIRAVSVD AVAEAAGLTK RTLYYHFKSK DELIAAYLEE 
RDQPNLKLFQ KWFSETDGDA ASKIKAIFLN LARAARHPKW KGCGFLRTSA ELANMPGHPA
IRIAAAHKRK FEDWLRQSFE TEGIAEAARL ARQMLLLLDG SFAVVLLHRD PSYMETAGEA
AATLVKLALS EPSVQQPAGR GK