| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2198 |
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| Symbol | |
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| ID | 5323058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2277553 |
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| End bp | 2280000 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791136 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001327866 |
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| Protein GI | 150397399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.138151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0335767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATT TGCCGTCTCA CGCACGCGTC GTGATCATTG GTGGGGGCGC CGTCGGCGCC
TCCTCGATCT ACCATCTCGC CAAGGCCGGC TGGACAGACT GCGTGCTTCT CGAAAAGAAC
GAGCTCACGG CCGGCTCCAC CTGGCATGCT GCTGGTAACG TGCCGACCTT CTCCTCGTCC
TGGTCGATCA TGAACATGCA GCGCTATTCG GCGTCGCTTT ACCGCGACCT GGGTGTGCAA
GTCGATTATC CGATGAACTA CCACGTGACG GGCTCCCTCC GTCTCGGCCA TACGAAGGAG
CGCCTGCAGG AATTCAAGCG CGTCGTGGGC ATGGGCCGCT ACCAGGGCAT GGAACTCGAC
ATTCTGGCGC CCGACGAAAT GCGCAGCCGC TATCCCTTCC TCGAGACGCA TGAGCTCACG
GGCGCGCTCT ACGACCCCTA TGACGGCGAC ATCGATCCGG CGCAGCTCAC GCAGGCGCTG
GCCAAGGGCG CACGCGACAT GGGTGCGAAG ATCATCCGCT TCTGTCCCGT GACCGGTGCC
CGGCGCGAAA AGGACGAATG GGTGATCGAG ACGCCGCAAG GCGAAATCCG CTGCGAATAC
GTTGTGAATG CGGCCGGCTA TTACGCCCGT GAGGTCGGCA GGATGTTCGG CCGCGACGTG
CCGATGATGG TGATGAGCCA TCAATATGTC CTCTTCGACG AGATTCCGGA ACTTGCCGCC
TGGTCCAAGG AGGCGGGTCA CAAGCTGCCG CTGCTGCGCG ACGTCGACAG CTCCTATTAT
CTCCGGCAGG AGAAATACGG CATGAATCTC GGCCCGTACG AGAAGAACTG TCGTGCTCAC
TGGACGACGA CGGACGATCC GATGCCGGAG GACTTTTCCT TCCAGCTCTT TCCGGACGAC
CTCGAAAGGC TCGAATGGTA TCTGAACGAC GCGGTCGAAC GCGTTCCGAT CCTCGGTACC
GCCGGACTCT CCCGCGTCAT CAACGGGCCG ATCCCCTACG CTCCGGATGG AAATCCGCTG
ATAGGGCCGA TGCCGGGCGT GCCGAACGCC TTCGAGGCCT GCGTCTTCAC CTTCGGCATT
TGCCAGGCTG GCGGTGCGGG CAAGGTCCTT GCGGAATGGG TGACCGAAGG TCAGACGGAA
TGGGACATGT GGTCCTGCGA TCCGCGCCGT TACACGGACT ACACCGATCA GGACTATTGC
ATCGCCAAGG GCATGCAGAT CTACGGCAAC GAATATGCGA TGCATTTCCC CAAGCACTAC
TGGCCGGCGG GGCGCAATAG AAAGCTTTCG CAGATCCATG ACCGCATTGC CGCACTCGGC
GCTCAGTTCA AGCCATATAA TGGCTGGGAA CGCGCCATGT GGTACGCCAA GCCGGGCGAC
GACACGTCGG AGGAGGCGAC GCAGACCTGG GGCAGGGAAG GCCCCTGGGC GAAGCGGATC
GAGGAGGAGT GCCTGGCCGT GCGCGACGCC GCGGGTATTC TCGACCTGCC TGGCTTCTCG
CGCTTTCGCT TGAAAGGCGA GGGCGCGCGC GAATGGCTTT CCGGTCTCAT TACCGGCCGC
GTGCCGAAGC CGGGCCGAAT CGGCCTTGCC TATTTCGCCG ATAGCAAAGG CCGCATCCTC
ACCGAAATGT CGGTCATGGC AATCGAGGAG GATTTCTTCT TCCTGATAAC CGCGGCGACG
GCGCAGTGGC ATGACTTCGA GTGGCTCCGG AAGCACCGCC CTGTTGATGC GGCTTTTACA
TTGGACGACG TGACGGCGAA TTTTTCATGC CAGATCCTGA CAGGCCCGAA ATCACGCGCG
ATCCTGGCCG AGGTCTGCGA TGCCGATCTT GCAAAGGGCT GGCTGACGCA CCAGACGGCT
CAGATCGCGG GGCGCTATTG CCAGCTCGTG CGGGTGTCTT TCGCCGGCGA GCTCGGTTGG
GAAATCCATA CCAAGATCGA CGATACCCCG GCGATCTTCG ACGCCGTGTG GGAAGCGGGC
CAGAAGCACG GCCTCAGGCC ATTCGGCATG GAAGCGCTCG ACAGCCTGCG CATAGAGAAG
GGTTACCGCG CCTGGAAGGG CGATCTTTCG ACAGATTATA CCGTGCTTCA GGGCGGCCTT
GAACGCTTTG TCGACTGGTC GAAGCCCGAC TTCAAGGGCA AGGCGGCACT GGAGCGCGAG
AAGCAACAGG GGGTTACCAG GCGTTTCGTG ACGTTGACGG TGGAGGCCGA GGCCTGCGAC
GCGCCCTACA TGTCGACGCT GTGGTCCGGG GGCGAGGTGG TCGGCGAGAC GACTTCCGGA
AACTGGGGCT ATCGGACAGG AAGATCGATC GCGCTCGGCA TGTTACGCGC CGATCTCGCC
GTTCCCGGGC GCGAGGTCGA GGTCGAGATT TTCGGCGACC GCTTCAAGGC CGTCGTGCAG
CCGGACCAGC CGCTTTGGGA TCCCTCGAAT GAAAGACTGA AAGCATGA
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| Protein sequence | MSNLPSHARV VIIGGGAVGA SSIYHLAKAG WTDCVLLEKN ELTAGSTWHA AGNVPTFSSS
WSIMNMQRYS ASLYRDLGVQ VDYPMNYHVT GSLRLGHTKE RLQEFKRVVG MGRYQGMELD
ILAPDEMRSR YPFLETHELT GALYDPYDGD IDPAQLTQAL AKGARDMGAK IIRFCPVTGA
RREKDEWVIE TPQGEIRCEY VVNAAGYYAR EVGRMFGRDV PMMVMSHQYV LFDEIPELAA
WSKEAGHKLP LLRDVDSSYY LRQEKYGMNL GPYEKNCRAH WTTTDDPMPE DFSFQLFPDD
LERLEWYLND AVERVPILGT AGLSRVINGP IPYAPDGNPL IGPMPGVPNA FEACVFTFGI
CQAGGAGKVL AEWVTEGQTE WDMWSCDPRR YTDYTDQDYC IAKGMQIYGN EYAMHFPKHY
WPAGRNRKLS QIHDRIAALG AQFKPYNGWE RAMWYAKPGD DTSEEATQTW GREGPWAKRI
EEECLAVRDA AGILDLPGFS RFRLKGEGAR EWLSGLITGR VPKPGRIGLA YFADSKGRIL
TEMSVMAIEE DFFFLITAAT AQWHDFEWLR KHRPVDAAFT LDDVTANFSC QILTGPKSRA
ILAEVCDADL AKGWLTHQTA QIAGRYCQLV RVSFAGELGW EIHTKIDDTP AIFDAVWEAG
QKHGLRPFGM EALDSLRIEK GYRAWKGDLS TDYTVLQGGL ERFVDWSKPD FKGKAALERE
KQQGVTRRFV TLTVEAEACD APYMSTLWSG GEVVGETTSG NWGYRTGRSI ALGMLRADLA
VPGREVEVEI FGDRFKAVVQ PDQPLWDPSN ERLKA
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