Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2191 |
Symbol | |
ID | 5323051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2266976 |
End bp | 2268403 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791129 |
Product | gamma-aminobutyraldehyde dehydrogenase |
Protein accession | YP_001327859 |
Protein GI | 150397392 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.011957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTC AGCTCTTGAT CGGATCCCGC TTCGAATCCG GAACGGAGGC CGAGGAGCAC ATCCTCAATC CGAGGACGGG CGCCGGGATC ATCGACCTGG CGGAGGCCTC CCATGCGCAG ATCGATGCCG CAGTCGACGC TGCCGAGCGT GCCTTCGCCA CCTGGTCGCA GACGACGCCG GCCGAACGCT CCAACGCCCT GCTGAAGATC GCCGATGCGA TCGAGAAGGA TGCCGACGGT TTCGCGGAAC TTGAGGCGTT GAACTGCGGC AAGCCGATCA ATGCGGTGAA GAACGATGAA TTGCCGGCGA TCATCGATTG CTGGCGCTTC TTCGCGGGTG CCGTGCGCAA TCTCCATGCG CCGGCGGCGG GCGAATATCT GCCGGGCCAC ACCTCCATGA TCCGCCGCGA TCCGATCGGG ATCGTCGGCT CGATCGCGCC CTGGAATTAC CCGCTGATGA TGATGGCCTG GAAGCTGGCC CCGGCGATCG GCGGCGGCAA CACCGTCGTC TTCAAGCCGT CCGAGCAGAC GCCGCTGACG GCGCTTAAAC TTGCTCGCGT CATCTCCGAC ATTCTGCCGG AGGGCGTCGT CAACGTCGTC ACCGGCCGCG GGGAGACCGT CGGCAACGCG CTGATCAACC ATCACAAGGT CGGGATGGTG TCGATCACCG GCGACATCGC CACCGGCAAG AAGGTGCTTG CCGCCGCCGC GAAGACTGTA AAGCGTACGC ATCTCGAACT CGGCGGCAAG GCGCCCGTGA TCGTCTATGA CGATGCCGAC CTCGAAGCGG TCGTAAACGG CATCCGCACC TTCGGTTACT ACAATGCCGG ACAGGATTGC ACTGCCGCCT GCCGCGTCTA TGCCGAAGCC GGCATCTACG AGAAGCTCGT CGCCGACCTC ACATCTGCCG TCTCGACCAT CCGCTACAAC CTCGAGGACG ACACTGAAAA CGAGATCGGC CCGCTGATCT CCAGGCGCCA GCGCGACCGC GTCGCAAGCT TCGTCGAAAG GGCTGCCGAC CAGAAGCACA TCGAGGTCAC CACCGGCGGC CGCGCCGGCA GCGAGCAGGG CTTCTTCTTT CAGCCCACCG TCGTCGCGGG CGCCACCCAG GAAGACGAGA TCGTGCGCCG CGAAGTCTTC GGTCCGGTAG TCTCCGTCAC CCGCTTCACC GAAAAGGACG ACGCGGTTGC CTGGGCGAAC GACAGCGATT ACGGCCTCGC CTCCTCCGTC TGGACGAAGG ATATCAGCAA GGCGATGAAG GCGGCGTCCC GACTGCAATA TGGCTGCACC TGGATCAACA CCCACTTCAT GCTGACCAAC GAAATGCCCC ATGGCGGCAT CAAGCAGTCG GGCTACGGCA AGGATATGTC GGTCTATGCG CTGGAGGACT ATACCGCCGT TCGCCACATC ATGATCAATC ACGGGTGA
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Protein sequence | MDTQLLIGSR FESGTEAEEH ILNPRTGAGI IDLAEASHAQ IDAAVDAAER AFATWSQTTP AERSNALLKI ADAIEKDADG FAELEALNCG KPINAVKNDE LPAIIDCWRF FAGAVRNLHA PAAGEYLPGH TSMIRRDPIG IVGSIAPWNY PLMMMAWKLA PAIGGGNTVV FKPSEQTPLT ALKLARVISD ILPEGVVNVV TGRGETVGNA LINHHKVGMV SITGDIATGK KVLAAAAKTV KRTHLELGGK APVIVYDDAD LEAVVNGIRT FGYYNAGQDC TAACRVYAEA GIYEKLVADL TSAVSTIRYN LEDDTENEIG PLISRRQRDR VASFVERAAD QKHIEVTTGG RAGSEQGFFF QPTVVAGATQ EDEIVRREVF GPVVSVTRFT EKDDAVAWAN DSDYGLASSV WTKDISKAMK AASRLQYGCT WINTHFMLTN EMPHGGIKQS GYGKDMSVYA LEDYTAVRHI MINHG
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