Gene Smed_2191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2191 
Symbol 
ID5323051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2266976 
End bp2268403 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content63% 
IMG OID640791129 
Productgamma-aminobutyraldehyde dehydrogenase 
Protein accessionYP_001327859 
Protein GI150397392 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR03374] 1-pyrroline dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.011957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTC AGCTCTTGAT CGGATCCCGC TTCGAATCCG GAACGGAGGC CGAGGAGCAC 
ATCCTCAATC CGAGGACGGG CGCCGGGATC ATCGACCTGG CGGAGGCCTC CCATGCGCAG
ATCGATGCCG CAGTCGACGC TGCCGAGCGT GCCTTCGCCA CCTGGTCGCA GACGACGCCG
GCCGAACGCT CCAACGCCCT GCTGAAGATC GCCGATGCGA TCGAGAAGGA TGCCGACGGT
TTCGCGGAAC TTGAGGCGTT GAACTGCGGC AAGCCGATCA ATGCGGTGAA GAACGATGAA
TTGCCGGCGA TCATCGATTG CTGGCGCTTC TTCGCGGGTG CCGTGCGCAA TCTCCATGCG
CCGGCGGCGG GCGAATATCT GCCGGGCCAC ACCTCCATGA TCCGCCGCGA TCCGATCGGG
ATCGTCGGCT CGATCGCGCC CTGGAATTAC CCGCTGATGA TGATGGCCTG GAAGCTGGCC
CCGGCGATCG GCGGCGGCAA CACCGTCGTC TTCAAGCCGT CCGAGCAGAC GCCGCTGACG
GCGCTTAAAC TTGCTCGCGT CATCTCCGAC ATTCTGCCGG AGGGCGTCGT CAACGTCGTC
ACCGGCCGCG GGGAGACCGT CGGCAACGCG CTGATCAACC ATCACAAGGT CGGGATGGTG
TCGATCACCG GCGACATCGC CACCGGCAAG AAGGTGCTTG CCGCCGCCGC GAAGACTGTA
AAGCGTACGC ATCTCGAACT CGGCGGCAAG GCGCCCGTGA TCGTCTATGA CGATGCCGAC
CTCGAAGCGG TCGTAAACGG CATCCGCACC TTCGGTTACT ACAATGCCGG ACAGGATTGC
ACTGCCGCCT GCCGCGTCTA TGCCGAAGCC GGCATCTACG AGAAGCTCGT CGCCGACCTC
ACATCTGCCG TCTCGACCAT CCGCTACAAC CTCGAGGACG ACACTGAAAA CGAGATCGGC
CCGCTGATCT CCAGGCGCCA GCGCGACCGC GTCGCAAGCT TCGTCGAAAG GGCTGCCGAC
CAGAAGCACA TCGAGGTCAC CACCGGCGGC CGCGCCGGCA GCGAGCAGGG CTTCTTCTTT
CAGCCCACCG TCGTCGCGGG CGCCACCCAG GAAGACGAGA TCGTGCGCCG CGAAGTCTTC
GGTCCGGTAG TCTCCGTCAC CCGCTTCACC GAAAAGGACG ACGCGGTTGC CTGGGCGAAC
GACAGCGATT ACGGCCTCGC CTCCTCCGTC TGGACGAAGG ATATCAGCAA GGCGATGAAG
GCGGCGTCCC GACTGCAATA TGGCTGCACC TGGATCAACA CCCACTTCAT GCTGACCAAC
GAAATGCCCC ATGGCGGCAT CAAGCAGTCG GGCTACGGCA AGGATATGTC GGTCTATGCG
CTGGAGGACT ATACCGCCGT TCGCCACATC ATGATCAATC ACGGGTGA
 
Protein sequence
MDTQLLIGSR FESGTEAEEH ILNPRTGAGI IDLAEASHAQ IDAAVDAAER AFATWSQTTP 
AERSNALLKI ADAIEKDADG FAELEALNCG KPINAVKNDE LPAIIDCWRF FAGAVRNLHA
PAAGEYLPGH TSMIRRDPIG IVGSIAPWNY PLMMMAWKLA PAIGGGNTVV FKPSEQTPLT
ALKLARVISD ILPEGVVNVV TGRGETVGNA LINHHKVGMV SITGDIATGK KVLAAAAKTV
KRTHLELGGK APVIVYDDAD LEAVVNGIRT FGYYNAGQDC TAACRVYAEA GIYEKLVADL
TSAVSTIRYN LEDDTENEIG PLISRRQRDR VASFVERAAD QKHIEVTTGG RAGSEQGFFF
QPTVVAGATQ EDEIVRREVF GPVVSVTRFT EKDDAVAWAN DSDYGLASSV WTKDISKAMK
AASRLQYGCT WINTHFMLTN EMPHGGIKQS GYGKDMSVYA LEDYTAVRHI MINHG