| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2189 |
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| Symbol | |
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| ID | 5323049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2265194 |
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| End bp | 2266144 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791127 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327857 |
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| Protein GI | 150397390 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.454813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0322224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG TCGCCGAGAG CATCATTCTT CCCCAACGCC GCAGCACGGC GGGCCGGCTT
TCGGATTTCC TCTGGCGGCA CCCTCATGTG CTTCTGGCGA TTTTCCTCGG GCCGCCGCTG
CTGTGGCTCG GGATTGTCTA TCTCGGTTCG CTCTTTGCGC TGCTCCTGCA AAGCTTCTTC
TCGATCGACG ACTTCTCCGG TCTCGTAAAC TACGAATTCA CGCTTGCCAC CTACCGGCAG
CTTTTGAGCG GAGCCAACCT CGACATCATC ATCCGTACCG TCACCATGGC CGCGGTGGTG
ACCCTCGTTT CGGCGCTCGT CGCCTTTCCA ATCGCCTATT ATGCGGCCCG TTATGCGCGC
GGGAAATGGA AGGCGCTCTT CTATCTCGCC GTTATGCTGC CGCTCTGGTC GAGCTATCTC
GTCAAGATTT ATGCCTGGAA GCTGATCCTG GCCAAGGAAG GCATCCTCAC CTGGATCTTC
CAGAAGCTGA ACCTCCTCTG GTTGATCGAT GCCTGGCTTT CTCTTCCGCT CGTCGGCGGC
AACTCGCTGT CGGTCAGCTA TACGGGCACC TTCATCGTCT TCGTCTACGT CTGGATGCCG
TTCATGATCC TGCCGATCCA GGCCGCGCTC GAGCGGGTAC CGGCGAGCCT GATCGAAGCC
TCGTCGGATC TCGGCGGCAC CCCGTCCCAG ACATTTCGCC ATGTGCTCTT TCCGCTGGCG
CTGCCGGGCA TAGTCGCGGG TTCGATTTTC ACATTCTCAC TGACGCTCGG CGATTACATC
ATTCCGCAGA TCGTCGGCTC GTCGCGGCTC TTCATCGGCC AGGCCGTCTA CGCGCAGCAG
GGGACCGCCG GCAATATTCC GCTCGCTGCC GCCTTCACGG TCGTGCCGAT CGTCATCATG
GGCGCCTATC TCTGGATGGC AAGACGCATG GGGGCTTTCG ATGCGCTCTG A
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| Protein sequence | MTIVAESIIL PQRRSTAGRL SDFLWRHPHV LLAIFLGPPL LWLGIVYLGS LFALLLQSFF
SIDDFSGLVN YEFTLATYRQ LLSGANLDII IRTVTMAAVV TLVSALVAFP IAYYAARYAR
GKWKALFYLA VMLPLWSSYL VKIYAWKLIL AKEGILTWIF QKLNLLWLID AWLSLPLVGG
NSLSVSYTGT FIVFVYVWMP FMILPIQAAL ERVPASLIEA SSDLGGTPSQ TFRHVLFPLA
LPGIVAGSIF TFSLTLGDYI IPQIVGSSRL FIGQAVYAQQ GTAGNIPLAA AFTVVPIVIM
GAYLWMARRM GAFDAL
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