| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2181 |
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| Symbol | |
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| ID | 5323041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2254348 |
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| End bp | 2255979 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791119 |
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| Product | ABC transporter related |
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| Protein accession | YP_001327849 |
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| Protein GI | 150397382 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.531002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.154194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC TGCTTTCCGT CAAGAACCTG AAGATCGAGG CGACGAGCTA TCCCCCGGGC
GAGCCGCCGA AGGTCGTCAC GCTGGTCGAG GGCGTTTCCT TCGACCTCGA AAAGGGCAAG
GTACTCGGCC TCATCGGCGA GTCCGGTGCC GGCAAATCGA CGATCGGTCT TTCTGCGCTG
GCCTATGGCC GCGGCGGATG CCGTATTATC GGCGGCGAGG TCCTGCTGAA CGGCAAGAAC
ATACTGACGC TCGGCCGCAG CGGCATCAAC GCCGTGCGCG GCGCACAGGT GTGCTACGTC
GCACAGTCCG CGGCCGCCGC CTTCAACCCC GCCCACAAGC TCGGCGACCA GGTGATCGAG
GCTTCGCTTC GCCACGGCAT CATGAGCCGT GAAGAGGCAA GCGAACGTGC GCTCTATCTG
TTCCGGGTCC TCGGCCTCCC CAACCCGGAA AACTTCGGCG ATCGCTACCC TCATCAGGTA
TCGGGCGGCC AATTGCAGCG CGCCATGACC GCCATGGCGC TTTGCTCCAA GCCGGATCTG
ATCGTCTTCG ACGAGCCGAC GACCGCGCTG GACGTGACCA CCCAGATCGA TGTGCTCGCG
GCGATAAAGC ACGCGATCGA GGAGACCGAT ACGGCGGCAC TCTACATCAC CCACGATCTC
GCGGTCGTAG CCCAGATTTC CGATGACATC ATGGTGCTGC GTCACGGCAA GACTGTCGAA
TACGGCACGA CGAAGCAGGT GATCGAGGCT CCGCGGGAGG AATACACCCG CGCCCTCGTC
AGCGTCCGTC AGGCCAAACG CGACGAAGCT CCGGACCAGA CCGGCTCGCT GCTCAAGATC
GAACATGTGC ATGCCGGCTA CGCGAACGGC TTCAAGGTAT TGCACGACGT CTCGATGCAC
CTGCCGAAGG GCCAGACGCT GGCAATCGTC GGCGAATCCG GCTCAGGCAA ATCGACGCTC
GCGCGCGTCA TCACCGGGCT GTTGCCGCCA AGCGAAGGGC GCATCACCTT CGAAGGAAAG
GAATTGCCGA AAGCGCTGAA AGGCCGATCC AACGACGAAC TGCGCCGGAT CCAGATGATC
TACCAGATGG CCGATACGGC GATGAACCCG CGCCAGACGG TGCGCGACAT CGTCGGGCGG
CCGCTCTCGT TCTACTTCGG CATGCACGGC GCCAGGAAGA CCGAGCGGGT CAAGGAACTG
CTGGACCAGA TCGAAATGGG GACGCCCTTC CTCGACCGTT ACCCGGCCGA GCTTTCCGGG
GGGCAGAAGC AGCGCGTTGC GATCGCCCGG GCGCTCGCCG CCCAACCGGA GATCATCCTC
TGCGACGAGC CGACTTCGGC GCTCGATCCG CTGGTTGCGG AAGGCATCCT GAACCTCCTT
CTGAAACTGC AGGAGGAAAC CGCCGTTTCC TATGTCTTCA TCACTCACGA CATCGCCATC
GTCCGGGCGA TCGCCGACAG CGTCGCCGTG ATGCATCGCG GTCGGCTGGT GCGCTTCGGC
CCGAAATCGA AAGTCCTTGC GCCGCCCTTT GATGACTATA CCGACCTGCT TCTGAAGTCG
GTTCCGGAAA TGGAAATCGG CTGGCTCGAA AAGGTGCTGC AGACGCGCCG GATGGAAAGT
GCCGGCAATT GA
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| Protein sequence | MPDLLSVKNL KIEATSYPPG EPPKVVTLVE GVSFDLEKGK VLGLIGESGA GKSTIGLSAL
AYGRGGCRII GGEVLLNGKN ILTLGRSGIN AVRGAQVCYV AQSAAAAFNP AHKLGDQVIE
ASLRHGIMSR EEASERALYL FRVLGLPNPE NFGDRYPHQV SGGQLQRAMT AMALCSKPDL
IVFDEPTTAL DVTTQIDVLA AIKHAIEETD TAALYITHDL AVVAQISDDI MVLRHGKTVE
YGTTKQVIEA PREEYTRALV SVRQAKRDEA PDQTGSLLKI EHVHAGYANG FKVLHDVSMH
LPKGQTLAIV GESGSGKSTL ARVITGLLPP SEGRITFEGK ELPKALKGRS NDELRRIQMI
YQMADTAMNP RQTVRDIVGR PLSFYFGMHG ARKTERVKEL LDQIEMGTPF LDRYPAELSG
GQKQRVAIAR ALAAQPEIIL CDEPTSALDP LVAEGILNLL LKLQEETAVS YVFITHDIAI
VRAIADSVAV MHRGRLVRFG PKSKVLAPPF DDYTDLLLKS VPEMEIGWLE KVLQTRRMES
AGN
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