| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2180 |
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| Symbol | |
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| ID | 5323040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2253528 |
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| End bp | 2254355 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791118 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327848 |
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| Protein GI | 150397381 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0891145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.386124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGA GAACCATACC CTTCAGTGCC TGGATCGGCA TCATCGGCAT TGCTATCGCA
ATTTTCTGCG CCCTCTTTGC TCCCCTTCTC GCCCCCTTTG GCGAGCGCGA GGTGGTGGGC
GATGTCTGGC TGCCGGCCGG CGGCGATTTC CTCCTCGGCA CGGACAATCT CGGCCGCGAC
CTGCTCTCGC GTCTGATCTA CGGCGCTCGA ACGACGATCT TCGTCGCGCT GGCGGCAACC
GTGATATCCT TCGCTCTCGG TATGATCCTG AGCTTCACCG CGGCCGTCAC CGGCGGCTTC
GTCGATCAAT TTTTCTCCCG CTTCAACGAC CTGATGATGG CGGTGCCGAC GCTGATTTTC
GCACTCGTCG TTCTCGCAGT GCTGCCGCAG CATCTGTGGA TCCTCGTCCT CGTCATGGCC
GTGCTCGATT CGACCCGTGT CTTCCGCATC GGCCGCGCCG TCGCACTCGA TGTCGCGGTC
ATGGAGTTCG TCGAGGCTGC GCGACTGCGC GGCGAAGGCA CTGTCTGGAT CATTTTCCGG
GAGATCCTGC CGAACACGCT GTCGCCACTC CTCGCCGAGT TCGGTCTGCG CTTCGCCTTC
TCGATCCTGT TCCTCTCCAC CCTCTCCTTC CTCGGCCTCG GCATTCAACC GCCGGCCGCC
GATTGGGGCG GCATGGTCAA GGACAACAAG GACGGCATCA TCTTCGGCAT ATCGGCCGCA
CTCATCCCTG GCGGCGCGAT CGCGGCCCTC GCAATCTGCG TCAATCTCGT CGTCGACTGG
CTGATGAAGC GCACCTCCAG CCTGAAAGGA GGCCGCGGCG ATGCCTGA
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| Protein sequence | MNLRTIPFSA WIGIIGIAIA IFCALFAPLL APFGEREVVG DVWLPAGGDF LLGTDNLGRD
LLSRLIYGAR TTIFVALAAT VISFALGMIL SFTAAVTGGF VDQFFSRFND LMMAVPTLIF
ALVVLAVLPQ HLWILVLVMA VLDSTRVFRI GRAVALDVAV MEFVEAARLR GEGTVWIIFR
EILPNTLSPL LAEFGLRFAF SILFLSTLSF LGLGIQPPAA DWGGMVKDNK DGIIFGISAA
LIPGGAIAAL AICVNLVVDW LMKRTSSLKG GRGDA
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