| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2179 |
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| Symbol | |
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| ID | 5323039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2252422 |
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| End bp | 2253531 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791117 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327847 |
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| Protein GI | 150397380 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00925001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.561279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA GCGGACCGAT CACGGGTCCG GTCGCGACGG ATGCGACCGC AGGCGAGACA
GCCCTGCGGT CCTCCGATCT TGCCGGTATC CCAGCCAAAC CCAACCCGGC CGCGGAAGAG
CGCGGCGGGA CGATCTGGCA GCGCTTCGCC TTTCGCCGCC CACTCGCCGC GCTGATCCTC
CAGCGCCTTG GCTTGAGCGT CGGCTTGCTC TTTGCCGTAT CGCTGATGAT CTTCGGCGGC
ATCGAAGCCC TGCCCGGCGA TTTCGCCACC ACTTATCTCG GCCAATCGGC GACACCCCAG
GCCGTCGAGA ACATCCGCCA GGATCTCGGG CTCGACCGCC CCTGGAGCGA GCGCTATCTC
AGTTGGCTCG GCGGTGCCGT TCAAGGCGAT TTCGGCACCT CATGGGCAAG CAGGAACTCC
GTCAGCGAAC AGATAGGCAA TCGCCTCGGC AACTCGCTCT TCCTCGCCTT CTTCGCGGCG
CTCGTCTCCG TGCCGCTCGC GGTGGGACTT GGAATGCTCG CGGTGCAATT CCGAAATCGC
CTGCCGGACA AGATCATCAA TGTGATATCG CTCGCGGCGA TTTCGCTGCC GGAGTTTTTC
ATCGGCTATC TGCTGATCAT GTACTTCGCC GTCGAATGGG GCGTAGCCAC CTTTCCCGCG
ACCGTCTATA ACGGCATGGG CTTTACCGAT CGGCTTTCGG CGATCGCACT TCCGGTCGCA
ACCCTCGTGC TGGTGGTTCT CGCTCATATG ATGCGCATGA CGCGCGCGGC GATCCTCAAC
GTCATGTCCT CGGCCTATGT GGAGACAGCC GAACTCAAGG GCCTCGGCAC GTTCCGCATC
ATCGCGCGCC ACGCCGCCCC CAACGCCGTG GCGCCTGTCA TCAACGTCAT CGCGTTGAAC
CTTGCCTATC TCGTCGTCGG CGTGGTCGTC GTCGAGGTCG TCTTCGTCTA TCCCGGCATG
GGGCAATATA TGGTGGATGC CGTAACGGTG CGCGATATGC CCGTCGTGCA GGCATGCGGG
CTGATCTTTG CGGCCTTCTA TATCTTCCTC AACATGGCGG CAGACATTCT CGCCATTCTC
GCCAATCCGA GATTGAGGCA TCCGCGATGA
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| Protein sequence | MMESGPITGP VATDATAGET ALRSSDLAGI PAKPNPAAEE RGGTIWQRFA FRRPLAALIL
QRLGLSVGLL FAVSLMIFGG IEALPGDFAT TYLGQSATPQ AVENIRQDLG LDRPWSERYL
SWLGGAVQGD FGTSWASRNS VSEQIGNRLG NSLFLAFFAA LVSVPLAVGL GMLAVQFRNR
LPDKIINVIS LAAISLPEFF IGYLLIMYFA VEWGVATFPA TVYNGMGFTD RLSAIALPVA
TLVLVVLAHM MRMTRAAILN VMSSAYVETA ELKGLGTFRI IARHAAPNAV APVINVIALN
LAYLVVGVVV VEVVFVYPGM GQYMVDAVTV RDMPVVQACG LIFAAFYIFL NMAADILAIL
ANPRLRHPR
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