| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2174 |
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| Symbol | |
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| ID | 5323034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2244802 |
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| End bp | 2246292 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791112 |
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| Product | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase |
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| Protein accession | YP_001327842 |
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| Protein GI | 150397375 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCA TTACCAAGGC CGCCTGTGTC GGCGGCGGCG TCATCGGCGG GGCCTGGGCT
GCGCGTTTTG CGCTTGCAGG GATAGACGTC AACATCTTCG ACCCGCATCC GGAGGCCGAG
CGCATTATCG GCGAGGTCAT GGCCAATGCT GAACGCGCTT ATGGCATGCT GACCATGGCG
CCGCTGCCGC CGCTCGGAAA ATTAACTTTC TGCAAGAGCA TTCAGGAAGC AGTCGAAGAC
GTTGACTGGA TTCAGGAAAG CGTGCCCGAA CGGCTGCCGC TGAAGCGCGG CGTCATCACC
GAAATCGACG CGGCCGCCCG GCCCGACGCA CTGATCGGCT CCTCCACTTC GGGACTGCTC
CCGTCCGACC TGCAGGCCGA GATGAAGCAC CCCGAACGCA TGTTCGTGGC CCATCCCTAC
AACCCGGTCT ATCTGCTGCC CCTGGTGGAG CTCGTCGGCG GCAAGAAGAC TTCGCCGCAA
ACGATCAGGC GCGCCGAAGA AGCCGTCGCC GAGATCGGCA TGAAAGGCGT TGTGATCGCC
AAGGAGATAG AGGCTTTCGT CGGCGACCGG CTGCTCGAGG CGTTATGGCG CGAGGCGCTG
TGGCTGATCC AGGATGACAT CTGCGATACC GAGACGCTCG ACGACGTCAT GCGCTATTCC
TTCGGCATGC GCTGGGCGCA GATGGGTCTC TTCGAAACTT ATCGAATCGC CGGCGGCGAA
GCCGGCATGC GCCACTTCCT CGCCCAGTTC GGCCCCTGCC TCAAATGGCC ATGGACGAAA
TTCACCGACG TGGTCGATCT GGACGAGGCG CTTGTCGAGA AGATCGGCGC GCAATCCGAC
GCGCAGGCCG CCGGTCGCTC GATCCGCGAG CTCGAGCGCA TCCGCGATGA GAATCTCGTC
GGCATCATGC ACGCCCTGAA AGCGAGCGAC GGCGGCAAGG GCTGGGGTGC GGGCAAGCTG
CTGGCCGATT TCGAGAAGCG GCTTTGGGCG AAGGGCGGCA CCCCCTCGAC AGCCCACGAT
GTTTCCGGGC CGCTGCGTCT GGTCGAGACC AGGGTCAATG CCGCCTGGGT CGACTACAAC
GGCCACATGA CCGAGCATCG CTATCTGCAG CTTTTCGGAG ATACCTCGGA TGCTCTGCTC
AAGCTGATCG GCGTCGACTT CGCCTATGTC GAGGCCGGTC ACAGCTACTA TACGGTCGAG
ACCCACATCC GCCATCTCGG CGAAGCCAAG CTGGGACAGG CACTCTATAC GACGCTGCAA
CTTCTTTCGT CCGACGAGAA GCGGATTCAC TTCTTCACCC GAATTCACGA TGCAGCTTCG
GGAGACGTGA TCGCCACCGC CGAACAGATG ATGCTGCATG TCGACGCCAA AGCCGGCAAG
TCCGTGCCGG CGCCGGCCGA GGTGATGGCG AAGCTGAAGC CGATCGCCGA AGGCCATGCG
AAGCTCGATG CGCCTGACGG CGCGGGGCGT CATGTGGGGC AGAAGCGGTA A
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| Protein sequence | MTTITKAACV GGGVIGGAWA ARFALAGIDV NIFDPHPEAE RIIGEVMANA ERAYGMLTMA
PLPPLGKLTF CKSIQEAVED VDWIQESVPE RLPLKRGVIT EIDAAARPDA LIGSSTSGLL
PSDLQAEMKH PERMFVAHPY NPVYLLPLVE LVGGKKTSPQ TIRRAEEAVA EIGMKGVVIA
KEIEAFVGDR LLEALWREAL WLIQDDICDT ETLDDVMRYS FGMRWAQMGL FETYRIAGGE
AGMRHFLAQF GPCLKWPWTK FTDVVDLDEA LVEKIGAQSD AQAAGRSIRE LERIRDENLV
GIMHALKASD GGKGWGAGKL LADFEKRLWA KGGTPSTAHD VSGPLRLVET RVNAAWVDYN
GHMTEHRYLQ LFGDTSDALL KLIGVDFAYV EAGHSYYTVE THIRHLGEAK LGQALYTTLQ
LLSSDEKRIH FFTRIHDAAS GDVIATAEQM MLHVDAKAGK SVPAPAEVMA KLKPIAEGHA
KLDAPDGAGR HVGQKR
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