Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2173 |
Symbol | |
ID | 5323033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2243708 |
End bp | 2244610 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791111 |
Product | hypothetical protein |
Protein accession | YP_001327841 |
Protein GI | 150397374 |
COG category | [S] Function unknown |
COG ID | [COG3246] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.414156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTCA GCATGAACCG CGAGGTGTTC ATCACATGCG CCGTCACCGG CGCCGGAGAC ACCGTCTCGA AATCCAGCAA CGTCCCGGTC ACGCCGAAAC AGATCGCCGA ATCGGCGATC GACGCCGCCA GAGCGGGCGC CGCCGTGGTG CACTGTCACG TGCGCGACCC CGAGACCGGT GCGCCGGCGC GCAGGCTCGA TCTCTACAAG GAAGTGACCG ATCGCATCCG CTCCGCCGAT ATCGACGTGG TGCTCAACCT GACCGCCGGC ATGGGCGGAG ACCTCGTCTT CGGGAATGTC GAAAACCCCT TTCCGGTCAA TGAAAAGGGT ACGGACATGG CCGGCGCCAC CGAACGCGTC GCCCATGTCG CCGAGTGCCT GCCTGAAATC TGCACGCTCG ATTGCGGCAC GATGAATTTC TCGCTCGGCG ATTACGTCAT GACAAACACG CCGTCGATGC TGCGCGAAAT GGCGCGCCAG ATGACCGCAC TCGGCGTGCG CCCCGAGATC GAAGCCTTCG ATACCGGGCA CCTTTGGTTC GCCAAGCAGC TCGTCGAGGA AGGCCTGATC GAGGATCCGG TGCTGATCCA GCTCTGCATG GGTATTCCGT GGGGCGCACC GGACGATCTC AACACTTTCA TGGCAATGGT CAACAACGTG CCCTCGAGCT GGACCTTCTC GGCCTTCTCG ATCGGCCGCA ACGCGATGGC CTATCCCGCC GCCGCAATCC TCGCCGGCGG CAACGTCCGC GTCGGCCTCG AGGATAATCT TTATGTCGGA AAGGGCCAGC TCGCGACCAA TGCCCAGCTC GTGGAGAAGG CGGTTTCCGT CGTGGAGAGC ATGGGCGCAA AGATCATCGG ACCGGAAGAG GTCCGCAGGA AGCTGAAGCT GACCAAGCGG TAA
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Protein sequence | MPLSMNREVF ITCAVTGAGD TVSKSSNVPV TPKQIAESAI DAARAGAAVV HCHVRDPETG APARRLDLYK EVTDRIRSAD IDVVLNLTAG MGGDLVFGNV ENPFPVNEKG TDMAGATERV AHVAECLPEI CTLDCGTMNF SLGDYVMTNT PSMLREMARQ MTALGVRPEI EAFDTGHLWF AKQLVEEGLI EDPVLIQLCM GIPWGAPDDL NTFMAMVNNV PSSWTFSAFS IGRNAMAYPA AAILAGGNVR VGLEDNLYVG KGQLATNAQL VEKAVSVVES MGAKIIGPEE VRRKLKLTKR
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