Gene Smed_2173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2173 
Symbol 
ID5323033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2243708 
End bp2244610 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID640791111 
Producthypothetical protein 
Protein accessionYP_001327841 
Protein GI150397374 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.414156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCA GCATGAACCG CGAGGTGTTC ATCACATGCG CCGTCACCGG CGCCGGAGAC 
ACCGTCTCGA AATCCAGCAA CGTCCCGGTC ACGCCGAAAC AGATCGCCGA ATCGGCGATC
GACGCCGCCA GAGCGGGCGC CGCCGTGGTG CACTGTCACG TGCGCGACCC CGAGACCGGT
GCGCCGGCGC GCAGGCTCGA TCTCTACAAG GAAGTGACCG ATCGCATCCG CTCCGCCGAT
ATCGACGTGG TGCTCAACCT GACCGCCGGC ATGGGCGGAG ACCTCGTCTT CGGGAATGTC
GAAAACCCCT TTCCGGTCAA TGAAAAGGGT ACGGACATGG CCGGCGCCAC CGAACGCGTC
GCCCATGTCG CCGAGTGCCT GCCTGAAATC TGCACGCTCG ATTGCGGCAC GATGAATTTC
TCGCTCGGCG ATTACGTCAT GACAAACACG CCGTCGATGC TGCGCGAAAT GGCGCGCCAG
ATGACCGCAC TCGGCGTGCG CCCCGAGATC GAAGCCTTCG ATACCGGGCA CCTTTGGTTC
GCCAAGCAGC TCGTCGAGGA AGGCCTGATC GAGGATCCGG TGCTGATCCA GCTCTGCATG
GGTATTCCGT GGGGCGCACC GGACGATCTC AACACTTTCA TGGCAATGGT CAACAACGTG
CCCTCGAGCT GGACCTTCTC GGCCTTCTCG ATCGGCCGCA ACGCGATGGC CTATCCCGCC
GCCGCAATCC TCGCCGGCGG CAACGTCCGC GTCGGCCTCG AGGATAATCT TTATGTCGGA
AAGGGCCAGC TCGCGACCAA TGCCCAGCTC GTGGAGAAGG CGGTTTCCGT CGTGGAGAGC
ATGGGCGCAA AGATCATCGG ACCGGAAGAG GTCCGCAGGA AGCTGAAGCT GACCAAGCGG
TAA
 
Protein sequence
MPLSMNREVF ITCAVTGAGD TVSKSSNVPV TPKQIAESAI DAARAGAAVV HCHVRDPETG 
APARRLDLYK EVTDRIRSAD IDVVLNLTAG MGGDLVFGNV ENPFPVNEKG TDMAGATERV
AHVAECLPEI CTLDCGTMNF SLGDYVMTNT PSMLREMARQ MTALGVRPEI EAFDTGHLWF
AKQLVEEGLI EDPVLIQLCM GIPWGAPDDL NTFMAMVNNV PSSWTFSAFS IGRNAMAYPA
AAILAGGNVR VGLEDNLYVG KGQLATNAQL VEKAVSVVES MGAKIIGPEE VRRKLKLTKR