| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2170 |
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| Symbol | |
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| ID | 5323030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2240929 |
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| End bp | 2241747 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791108 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001327838 |
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| Protein GI | 150397371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00609739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCT TCATCTCGTC GGTCTATCTC TTCCTCTATG CGCCGATCGC CCTCGTCGTG
CTGTTCTCGT TCAATGCCGG CCGCAATGCG AGCGAGTTCG CGGGCTTCTC GACTGCATGG
TACGGCAAGG CGCTCGGCAA CACCTTCCTC ATCTCCGCGC TGCAGAACAG CCTGCTCATT
GCCTTCACCA GCGCCGCACT CGCCGCCGTC TTCGGGACCA TGGCGGCGCT CGGCATGGAG
CGGCTCGGCC CCCGCATGCG CGCGCTCTTC GACGCACTCT TCGCAGCCGC GATCGTCGTG
CCCGGCGTCG TCATCGGCAT TGCCACGCTT GTTGCACTGG TTGCGGTGTT CTCCTTCGTC
AACCCGGCAA TTGCAGCCTT TTGGTCGGGC GATCGACCGC CGCAGCTAGG GCTCGGTTAC
GGATCGATCA TCGCCGCCCA TGGCCTTTTT TCGATGGCGC TCGTCACCAT GATCGTCAAG
GCGCGGATCG CGAGCCTCGG CCGCGACATC GTCGAAGCGT CAGGCGATCT CTATGCGACG
CCGCTCACCA CCTTCCGGCT CATCGTCCTG CCGCAGATCC TGCCTTCGAT CCTCGCAGGC
TTCCTCCTCG CTTTCACCTT CTCCTTCGAC GACTTCATCA TCGCCTTCTT CGTCGCCGGT
TCGAAGACAA CCCTGCCGAT CTATGTCTTC GCCTCGATCC GCCGGGGCGT GACGCCGGAA
ATCAATGCGA TCGCGACTCT GGTTCTGGTC GCGTCGCTGC TTCTGATCCT GACCGCCCGC
GTGCTCATGC GCGAAAAGAA AAGCAAATCC GGGGAGTAA
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| Protein sequence | MRAFISSVYL FLYAPIALVV LFSFNAGRNA SEFAGFSTAW YGKALGNTFL ISALQNSLLI
AFTSAALAAV FGTMAALGME RLGPRMRALF DALFAAAIVV PGVVIGIATL VALVAVFSFV
NPAIAAFWSG DRPPQLGLGY GSIIAAHGLF SMALVTMIVK ARIASLGRDI VEASGDLYAT
PLTTFRLIVL PQILPSILAG FLLAFTFSFD DFIIAFFVAG SKTTLPIYVF ASIRRGVTPE
INAIATLVLV ASLLLILTAR VLMREKKSKS GE
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