| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2167 |
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| Symbol | |
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| ID | 5323027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2237663 |
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| End bp | 2238742 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791105 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001327835 |
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| Protein GI | 150397368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCCG CTTCGACGAA CGACATCGAA TTCCGTTCGG TCGCCAAACG CTATGGCAGC
GTAACGGCCG TGTCGGACAT CAACCTGGCA GTGCCTAAGG GCGCCTTCGT CGCACTGCTC
GGTCCCTCCG GCTGCGGCAA GACCACATGC CTGCGCATGA TCGGCGGCTT CGAACAGCCG
AGCGAAGGCA CGGTCCATAT CGGCGGCCAG CCGATGAACG GCGTGCCTGC CTATCGCCGT
CCCGTCAACA TGGTCTTCCA GCAATACGCG CTCTTCCCGC ATCTCGATGT CGAACAGAAC
GTCGCCTACG GCTTGAGGCA GATGCGTCCG CGCATTCCGT CGGCCGAGAT CACCCGGCGG
GCACGCGAGG CTCTGGACAT GGTTCGCCTC GGCGGCTTCG GCAAGCGCCG TATCCACGAG
ATGTCCGGCG GGCAGCAGCA GCGCGTCGCG CTTGCCCGCG CGATCGTCAA CAAACCGAAG
GTGCTGCTCC TCGATGAGCC GCTCGCAGCA CTGGACAAGA AGCTTCGCAC CGCCATGCAG
ATCGAGCTTC AAAGCCTGCA GCGCGAACTT GGCATCACCT TCGTGCTCGT CACGCATGAT
CAGGAGGAGG CGCTCTCGAT GAGCGACTTC GTCTGCGTCA TGAGCACCGG CCGTATCGTG
CAGATGGGGC CGCCGCAGGA GATCTATGAC CGACCTGCAA GCCTCTTCGT CGCCGACTTC
GTCGGCAAGA CCAACCGCAT CGCCGCCACG ATCGAACCCG GCGCGGGCGC TGTCCGGCTT
GCAAACGGCG TCGGCCTCGC CAAACCGGCC CGCGCCAACG GCACGACGGG GTCGGTCACG
GTGGCGCTGC GCCCGGAGGC GATCAGTCTC GTGCGCAACG GCAGCGCCAC GCTGAGCGGA
ACCGTGACCC ACCGCATATT TCTCGGCTCG TCCGTCGAGT ATTCGGTCGA TGTCGAGGGT
CTCGGTGATT TTCTCGTTAC CGCCGATCGC CGCAGCCTGG ACGAACGCGA CCTCGCCGAG
CCCGGCGAAA GGATCGGGCT CAGCTTCGAC CCGAATGCAC TCCATGTCTT TCCGGCCTGA
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| Protein sequence | MTSASTNDIE FRSVAKRYGS VTAVSDINLA VPKGAFVALL GPSGCGKTTC LRMIGGFEQP
SEGTVHIGGQ PMNGVPAYRR PVNMVFQQYA LFPHLDVEQN VAYGLRQMRP RIPSAEITRR
AREALDMVRL GGFGKRRIHE MSGGQQQRVA LARAIVNKPK VLLLDEPLAA LDKKLRTAMQ
IELQSLQREL GITFVLVTHD QEEALSMSDF VCVMSTGRIV QMGPPQEIYD RPASLFVADF
VGKTNRIAAT IEPGAGAVRL ANGVGLAKPA RANGTTGSVT VALRPEAISL VRNGSATLSG
TVTHRIFLGS SVEYSVDVEG LGDFLVTADR RSLDERDLAE PGERIGLSFD PNALHVFPA
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