| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2165 |
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| Symbol | |
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| ID | 5323025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2235539 |
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| End bp | 2236576 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791103 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001327833 |
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| Protein GI | 150397366 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TTTCATATCG AGATAAAAAT ATCATGCGCT GCAAAAATTA TCATGCGGCG
CAGCATCGGG CGGGAGACAT GGCGATCATC GGGGGAACAA GTGTCCGCGA CGACGAGGCG
AGCATGGCGA CCCGTGCCGC CTGGCTGCAC TACGCCGGCG GGCTGACCCA GGCCGAGGTC
GCCAAACGCC TGGGGCTCAC ATCGCTCAAG GCGCACCGGC TGATCATGAA AGCCAACCAG
GAAGGATTGG TGAAGGTCTA TATCGACGGG GACGTCTCAG AATGCGTCGA GCTGGAGCAG
AAGCTTTCCA GCCGTTACGG TCTGGACTAT TGCGAGGTGG TTCCCGATTT CGACAGCGAA
GACCTGCCGC TGAAGGCGCT CGGCATCTCA GGCGCGCAGT TTCTAAGGCG GGAGATCGAA
CGCGGAGAGA CGGCGCTGAT CGGGGTCGGC CACGGCAGAA CGCTCGCAGC CAGCATTGAG
TACATGCCGC GCACGGCGAG CAACAACACG CGCTTCGTCT CCCTGCTCGG CGGCCTCACG
CGCAAATTCT CCGCCAATCC CCATGACGTG ATCCACCGCC TGGCTGAGCG CACCGGCGCC
GAGGCCTATG TCATGCCGGT GCCGTTCTTC GCCAACACGG TTGAGGATCG GGACGTCCTC
TTCAGCCAGC GGGGCGTGCG CGAAGTCTTC GATCTTGCGA AATCGGCCGA CCTCCTGATG
GTCGGCATAG GCACCGCCGA ACGCGAGGCC TCGCTGGTGG CGACCGGTAT GATCGAGATG
AGCGAGATAG AGCAGATCCA GAAATGCGGC GGCACGGGTG AGCTGCTCGG GCACTTCTTC
GACGAGAAGG GCAGGCCGAT CGAAACGGCG CTTTCCAACC GCACCTTCAC GCTTGGTCGG
GAGGACCTGA AGAACCGCCG CACCGTTGCG GTTGCCGGGG GCAGGATCAA GACCCGTGCC
ATTCGCGCGG TTCTCGGCAG CGGGTTCCTG AGCGGGCTCG TCACGGACGA GCGCACCGCA
CAGGCGCTCG CCGCGTAG
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| Protein sequence | MKIISYRDKN IMRCKNYHAA QHRAGDMAII GGTSVRDDEA SMATRAAWLH YAGGLTQAEV
AKRLGLTSLK AHRLIMKANQ EGLVKVYIDG DVSECVELEQ KLSSRYGLDY CEVVPDFDSE
DLPLKALGIS GAQFLRREIE RGETALIGVG HGRTLAASIE YMPRTASNNT RFVSLLGGLT
RKFSANPHDV IHRLAERTGA EAYVMPVPFF ANTVEDRDVL FSQRGVREVF DLAKSADLLM
VGIGTAEREA SLVATGMIEM SEIEQIQKCG GTGELLGHFF DEKGRPIETA LSNRTFTLGR
EDLKNRRTVA VAGGRIKTRA IRAVLGSGFL SGLVTDERTA QALAA
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