Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2163 |
Symbol | |
ID | 5323023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2232873 |
End bp | 2233796 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640791101 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001327831 |
Protein GI | 150397364 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0631921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCAG TAACGCACTC CAGCGCAAGG CGCAGCAGGT TCAGGATCAG CAAAAGGGTT TTACCCTATG TGCTCTCCCT GCCGGCGCTT CTCGTGTGTA TCGGCATCCT GATCCCGTTC TTCACGGCGG TGATCTATTC CTTCCAGCGC TACAGGCTGA GCCAGCCCTG GGCACGTCAG TTCAACTGGG GTGACAACTA CCTGAATTTC TTCACGGATC CGGGCTTCTG GAACACGCTG AAGATCTCGC TGCTCTATGC CGGCGTCACG GTGACCCTGG AGCTGCTGCT CGGTCTCGGC ATTGCGCTGC TCCTGCAGCG CCGCTCCACG GTCAACAACT TCATCTCGAT CATGCTGCTC CTGCCGCTGA TGACGGCGCC GGCGCTCGCG GCGCTGATGT GGAAGCTGAT GACCAATCCC GGCTTCGGCA TCCTGAGCTA CCTCGCAAGT CTCATCGGGC TGGAGAATTT CCGCTGGGCT TCGTCGCCGG ATACGGCGCT CCTGACGGTC GTGCTCGTCG ATATCTGGGT CTATACGCCC TTTATTATGA TCCTGCTCCT GGCAGGCCTA CGCTCGCTGC CGACGCAGCC TTTCGAGGCG GCGGCGCTCG ATGGCGTGCC GCGCAGCTTC GTCTTCTTCC GCATCACCCT GCCCATGCTG ACGCCCTATA TCCTGACGGC GACGCTGTTC CGCCTGCTCG ATTCGATCCA GCAGTTCGAC ATCATCTACG CGATGACGCA AGGAGGGCCG GGCGACACCC TTACCGTCTT CCAGGTCGAG GCTTACCTCA ACTTCTTCCA GTCGACCAAT GTGGGCCGGT CCGCGGCGCT GCTGATCATC CTCTGGGCGA TCACCTACAT ATTGTCGAAC ATCTTCATCA AGAACTGGCT CCGGCTGCGC GAACGCGCCC GCGGCGAAGC GTAA
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Protein sequence | MASVTHSSAR RSRFRISKRV LPYVLSLPAL LVCIGILIPF FTAVIYSFQR YRLSQPWARQ FNWGDNYLNF FTDPGFWNTL KISLLYAGVT VTLELLLGLG IALLLQRRST VNNFISIMLL LPLMTAPALA ALMWKLMTNP GFGILSYLAS LIGLENFRWA SSPDTALLTV VLVDIWVYTP FIMILLLAGL RSLPTQPFEA AALDGVPRSF VFFRITLPML TPYILTATLF RLLDSIQQFD IIYAMTQGGP GDTLTVFQVE AYLNFFQSTN VGRSAALLII LWAITYILSN IFIKNWLRLR ERARGEA
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