Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2152 |
Symbol | |
ID | 5323012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2220779 |
End bp | 2221708 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791090 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001327820 |
Protein GI | 150397353 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.094367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTTCA CGCTGTCGCT CAACACCAAT CCGCTGGTCA ACCGCTTTGC CGAGGCGGAC GATCTGATCG ACACCATCGC CGACAAGATC CGCATCGGCC ATGTCCAGCT CACCCATGAA TTCGTCAATC CCGGCTGGCC TGCGTCGACC ATCAACAAGG CGCTCCGGCA ATTTCGAACC GCGCTCGCCC GAACCGGCGT GAAGATCACG TCCGGGATGA CGGGCCCCTA CGGCCGTCTC AACCATTTCG GCCACCCGGA CTCGGATGTC CGGCGCTACT ATGTCGACTG GTTCAAGACC TTTGCCGATA TCTCCGCCGA GCTCGGCGCT TCCGGCATGG GGACGCAGTT CGCGATCTTC ACGCTCAGAG ACTATGACGA TCCGGCGCGA CGCGAGGAAC TGATCGCGAT CGCCATTGAC TGCTGGCGCG AAGTTGCTCA GCATGCGAAG GCGGCAGGCC TCTCCTATCT GTTCTGGGAG CCGATGTCGG TCGGCCGCGA GTTTGGTCAC ACGATCGCAG AGTGCAGGGC GCTCGATCAA CGCCTGGCCA CGGCCGGGTT CTCGATCCCG ATGAAGATGA TGGTCGATAT CGACCATGGC GACGTGACAT CGCCCAACGC TGCCGACGTC GATCCTTATG CCTGGGCACA GGCCTTTCCT AAACAGTCAC CCATCATTCA TATCAAGCAG TCGTCCATGA ACAAGGGCGG GCACTGGCCC TTCACAGCCG CCTACAACAA AGATGGCCGC ATCACGCCGG AACGCCTGTT AGATGCAGTA AGGAGGGGAG GCGGTACGGA CAATGAGATC TGTCTCGAGC TCTCCTTCCG CGAGCGCGAG CCGACCGACC GCAACGTGGT GGAAATGATC CAGGAGTCGG TCGAATTCTG GGAACCTCAT ATCGATACCG GCTTTAACAA TCCCAAATGA
|
Protein sequence | MAFTLSLNTN PLVNRFAEAD DLIDTIADKI RIGHVQLTHE FVNPGWPAST INKALRQFRT ALARTGVKIT SGMTGPYGRL NHFGHPDSDV RRYYVDWFKT FADISAELGA SGMGTQFAIF TLRDYDDPAR REELIAIAID CWREVAQHAK AAGLSYLFWE PMSVGREFGH TIAECRALDQ RLATAGFSIP MKMMVDIDHG DVTSPNAADV DPYAWAQAFP KQSPIIHIKQ SSMNKGGHWP FTAAYNKDGR ITPERLLDAV RRGGGTDNEI CLELSFRERE PTDRNVVEMI QESVEFWEPH IDTGFNNPK
|
| |