Gene Smed_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2152 
Symbol 
ID5323012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2220779 
End bp2221708 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content60% 
IMG OID640791090 
Productxylose isomerase domain-containing protein 
Protein accessionYP_001327820 
Protein GI150397353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.094367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA CGCTGTCGCT CAACACCAAT CCGCTGGTCA ACCGCTTTGC CGAGGCGGAC 
GATCTGATCG ACACCATCGC CGACAAGATC CGCATCGGCC ATGTCCAGCT CACCCATGAA
TTCGTCAATC CCGGCTGGCC TGCGTCGACC ATCAACAAGG CGCTCCGGCA ATTTCGAACC
GCGCTCGCCC GAACCGGCGT GAAGATCACG TCCGGGATGA CGGGCCCCTA CGGCCGTCTC
AACCATTTCG GCCACCCGGA CTCGGATGTC CGGCGCTACT ATGTCGACTG GTTCAAGACC
TTTGCCGATA TCTCCGCCGA GCTCGGCGCT TCCGGCATGG GGACGCAGTT CGCGATCTTC
ACGCTCAGAG ACTATGACGA TCCGGCGCGA CGCGAGGAAC TGATCGCGAT CGCCATTGAC
TGCTGGCGCG AAGTTGCTCA GCATGCGAAG GCGGCAGGCC TCTCCTATCT GTTCTGGGAG
CCGATGTCGG TCGGCCGCGA GTTTGGTCAC ACGATCGCAG AGTGCAGGGC GCTCGATCAA
CGCCTGGCCA CGGCCGGGTT CTCGATCCCG ATGAAGATGA TGGTCGATAT CGACCATGGC
GACGTGACAT CGCCCAACGC TGCCGACGTC GATCCTTATG CCTGGGCACA GGCCTTTCCT
AAACAGTCAC CCATCATTCA TATCAAGCAG TCGTCCATGA ACAAGGGCGG GCACTGGCCC
TTCACAGCCG CCTACAACAA AGATGGCCGC ATCACGCCGG AACGCCTGTT AGATGCAGTA
AGGAGGGGAG GCGGTACGGA CAATGAGATC TGTCTCGAGC TCTCCTTCCG CGAGCGCGAG
CCGACCGACC GCAACGTGGT GGAAATGATC CAGGAGTCGG TCGAATTCTG GGAACCTCAT
ATCGATACCG GCTTTAACAA TCCCAAATGA
 
Protein sequence
MAFTLSLNTN PLVNRFAEAD DLIDTIADKI RIGHVQLTHE FVNPGWPAST INKALRQFRT 
ALARTGVKIT SGMTGPYGRL NHFGHPDSDV RRYYVDWFKT FADISAELGA SGMGTQFAIF
TLRDYDDPAR REELIAIAID CWREVAQHAK AAGLSYLFWE PMSVGREFGH TIAECRALDQ
RLATAGFSIP MKMMVDIDHG DVTSPNAADV DPYAWAQAFP KQSPIIHIKQ SSMNKGGHWP
FTAAYNKDGR ITPERLLDAV RRGGGTDNEI CLELSFRERE PTDRNVVEMI QESVEFWEPH
IDTGFNNPK