| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2140 |
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| Symbol | |
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| ID | 5323000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2206897 |
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| End bp | 2209119 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791078 |
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| Product | ferrichrome receptor precursor protein |
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| Protein accession | YP_001327808 |
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| Protein GI | 150397341 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.262117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCA GAGTTCGCGG AGCGCATCTT AGAAACCTTC TGGCGAGCGG GGTGGCGCTT
GCGCCGCTGG TGACAAGCGG ATTGGCTTTT GCGCAGGATG GCGATGCCAC ACAGCTTGAG
CGGATAATTG TAGAAGGGGG CAATACGGCG GGCGCGGGCG CTACGGGACC TGTCGAGGGT
TATGTTGCCA AGGCGAGCGC GACCGGTTCC AAGACCGCGA CCCAGATTAC CGAAATCCCT
CAGTCGGTCT CCGTCGTCGG CCGCGAGGAA CTGGACGACC GCGCCGTGGT CAACAAGGTC
GATGAAGCCT TGCGCTATAC GCCAGGGGTC CTGTCGGCGC CTTTCGGCAC CGATCCGGAC
ACGGACTGGT TCTTTATTCG CGGTTTCGAT GCGGCCCAGA CGGGTCTCTT CCTCGACGGT
CTGCCGCTCT TCAGTTTCGG CTTCGGCAAT TTTCAGATCG ACCCCTTCAT GCTGGAACGG
ATCGAAGTGC TGAAGGGGCC GGCCTCCGTC CTCTATGGCG GGTCCAATCC CGGCGGTATC
ATAAATCTGA TCAGCAAGAG ACCGCTTGAC GAGCCGCTCT ACTATACCGA GGCGGGCATC
AACAGCGACG GCAACGCCTT CACCGGCTTC GACGTGAATG ACATGCTGAC TGATGACGGA
ACCGTACGCT ATCGCCTGAC CGGCAAGATC GCCGGCGGCG ACAATTATTC AGATTATTCC
GAGGACCTCC GCGGCTTCAT CCTGCCGCAG GTGACCTATG CGCCGGATGA TGCGACCAGC
CTGACGGTGT TTGGGCTGCT CCAGGGCCTT GACCAGGTGC ATGTCGGCAA CGGCTTTCTG
CCCTATGTCG GAACCGTGGT CGACGCGCCC TTCGGCAAGA TCGATCGGGA TGCCTATTTC
GGCGAACCTG ACCTCGACGA GGGAACCTAT GCCCAGCAGA TGCTCGGCTA CGAGTTCAAG
CACGATTTTG ACAGCGGCTG GACCTTCACC CAGAATGCAC GCTACGCCCA TCTTCACAAG
CATGAGAAAT ACCCTTATCC CTACGGCTAT GTCGGCCCCG GCTTCGGCAA TATAGAGCCC
ATCGCTCCAG ACTACCTTCT GAACCGCATA GGCTTTGAGG CGACGTCGAA GGTGGACAGC
TTCTCGATCG ATAATCGCGC CGAGACGGAT TTCGATCTGG GCACGACGAA TCACACGTTC
GTGGCCGGCC TCGATTACAA ATATTACCGC CTCGACCATA TCGGGGCTTC GGGAGGCGCG
ACGCCGATCA GCCCCACCGA TCCGGTCTAT GGGGTACCAC AGGGCCCGAC GGCCGTTTAT
ATCAATCAGA TTTTCACGCA GCAGCAGATA GGCATCTATG CTCAGGACCA GGTGCGCTTC
GGCGACGGTT GGCTCGTTAC GCTCAATGGG CGCTACGACT ATGTCGACAC CGACCTCAAG
AACGGGGCTA CCGCCTGGGC CGGTCCATCC AACTTCGGAT ATGACGACGG CGCACTCAGT
GGCCGAGCCG GCCTCGGTTA CGAGTTCGAC AACGGTCTCA CCCCCTATGT GAGCGTCGCC
ACCTTCTTCA ACCCGCTTGT AGGTTCGCGC GACTCGAACC CCGATCCTGC CATCACGACC
CTGGTGCCCT TGAGACCCGA GGAGGGATAC CAGTACGAAG CGGGAATCAA ATACGAGCCG
ACATTTATCG ACGGCTTGAT CACCGCCTCG CTGTTCCAGA TCACCAAACA AAACGTGCAG
GTGACCGATA CGCTCGGAAT TTCCACGCAA CTCGGCGAGG TGCGCTCCCG CGGCTTCGAA
CTCGAGGGCA AGGTGAACAT CGACGATAAC TGGAAGATCA TTTCGGCGTT CACCTATACC
GACCTCGAGA TCACGGAGGA CACCAATCCG TCGCTGCTCG GCAAGTCGCC CTACCTGATA
CCTGAGACAC AAGCTGCCCT GTGGCTCGAT TACACCGCGA CCAGCGGCGC TTTCGAGGGC
ATGAGCCTCG GCGCAGGTGT ACGCCGCCAG GGCGAGTCCT GGGCCGATGC TGCAAACACG
AAGAAAGTCC CCGCGGCGAC GCTCGTGGAT GCCGCCATCC GCTACGAGAA GAACGACTGG
ACGGCATCGC TCAATGTCGC CAACCTTTTC GACAAGGAAT ATGTCAGCGG ATGCCAGGGG
CTTCTGACCT GCGGTTATGG CGAAAGCAGA ACGTTCACGC TCAAGCTCAG CAAGAAGTGG
TAA
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| Protein sequence | MKCRVRGAHL RNLLASGVAL APLVTSGLAF AQDGDATQLE RIIVEGGNTA GAGATGPVEG
YVAKASATGS KTATQITEIP QSVSVVGREE LDDRAVVNKV DEALRYTPGV LSAPFGTDPD
TDWFFIRGFD AAQTGLFLDG LPLFSFGFGN FQIDPFMLER IEVLKGPASV LYGGSNPGGI
INLISKRPLD EPLYYTEAGI NSDGNAFTGF DVNDMLTDDG TVRYRLTGKI AGGDNYSDYS
EDLRGFILPQ VTYAPDDATS LTVFGLLQGL DQVHVGNGFL PYVGTVVDAP FGKIDRDAYF
GEPDLDEGTY AQQMLGYEFK HDFDSGWTFT QNARYAHLHK HEKYPYPYGY VGPGFGNIEP
IAPDYLLNRI GFEATSKVDS FSIDNRAETD FDLGTTNHTF VAGLDYKYYR LDHIGASGGA
TPISPTDPVY GVPQGPTAVY INQIFTQQQI GIYAQDQVRF GDGWLVTLNG RYDYVDTDLK
NGATAWAGPS NFGYDDGALS GRAGLGYEFD NGLTPYVSVA TFFNPLVGSR DSNPDPAITT
LVPLRPEEGY QYEAGIKYEP TFIDGLITAS LFQITKQNVQ VTDTLGISTQ LGEVRSRGFE
LEGKVNIDDN WKIISAFTYT DLEITEDTNP SLLGKSPYLI PETQAALWLD YTATSGAFEG
MSLGAGVRRQ GESWADAANT KKVPAATLVD AAIRYEKNDW TASLNVANLF DKEYVSGCQG
LLTCGYGESR TFTLKLSKKW
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