| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2139 |
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| Symbol | |
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| ID | 5322999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2205851 |
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| End bp | 2206735 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791077 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001327807 |
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| Protein GI | 150397340 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.957349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTC AGCCGCGCAT GCAGAACCGG ATCAGCGGAT TTTCGATCAT CGGCGGCCTC
AACCGCCGGG AATGGAACGG TGTGGTTGCG GATGTCTGGG ACGTGGAATG CGTTCCGCAT
GCGGGCGGCT ACTACATAGC CGAGGATCCC CGCATGTTCA TCGTGCTCGA CGCGAAAGGC
GGCGGCAATT GCCGGGTGAA GCTCGCCGCC AACGGCGAGG GCGCGGTCCA GAATTATCAT
CGGCATGCCC TGTCCTATAT CCCCGCGGGG ATGGAACTAT GGACCGACCT CGTCGACATC
AACTACATCC GGCATCTCGA TCTGCATTTC GATATCGATG CGCTCGGGCG GCGTCTCAGG
GAAGATCTGG ATCCCGCTGC CGTCGACACG CCGCGGCTCA TGTTCCAGGA TGAGCGCTTC
CTGAGGCTTG CCGGGCTGAT CGCAGCCGAA TGCCTCAACC CCCAGCCTCT CCATGATCTT
TATGGCGACG GACTGACGGT GGCTCTGTTC ATCGACCTCA TGAAGATCGC AAAGCGCAGC
GGCCGCAAGC GCAGCCAGCT TGCGGCCTGG CAGTTGCGCC GGGCGGTCGA TTTCATCGAG
GAGAACTTCG CCCGCAATGT GCGGCTCGAG GAACTCGCCG ACCTCACCGG CCTGTCGCAA
TCGCATTTCA GCCATGCCTT CAAGGCTTCG ACGGGTGTCG CCCCGCATCA ATGGCACATG
AACGCCCGTG TCGAACGGGC AAAACAGATG CTGGTCGAGA GCGAGGGCCC GCTGACCTCG
ATAGCCGCGG AAACGGGCTT TGCCGATCAG GCGCATTTCA CCCGCGTCTT TCGCAAGACG
GTCGGCACGA CGCCGGCACT ATGGAAGAAA AGTCACACCG CCTGA
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| Protein sequence | MTFQPRMQNR ISGFSIIGGL NRREWNGVVA DVWDVECVPH AGGYYIAEDP RMFIVLDAKG
GGNCRVKLAA NGEGAVQNYH RHALSYIPAG MELWTDLVDI NYIRHLDLHF DIDALGRRLR
EDLDPAAVDT PRLMFQDERF LRLAGLIAAE CLNPQPLHDL YGDGLTVALF IDLMKIAKRS
GRKRSQLAAW QLRRAVDFIE ENFARNVRLE ELADLTGLSQ SHFSHAFKAS TGVAPHQWHM
NARVERAKQM LVESEGPLTS IAAETGFADQ AHFTRVFRKT VGTTPALWKK SHTA
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