| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2131 |
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| Symbol | |
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| ID | 5322991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2197238 |
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| End bp | 2198785 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791069 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001327799 |
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| Protein GI | 150397332 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.702859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACT ACTCGGAAAT CGACAAGAAG CAGGACCTGC AGGTCCTGCA TTCAATGGGC
TACGCCCAGG AACTCGAACG GCGAATGAGT CAATTCTCGA ATTTCGCCGT ATCCTTCTCG
ATCATTTGCA TCCTGTCGGG CGGCATCAAC TCGCTCGCAC AGGCAACGTC CGGCGCCGGT
GGCGCCGCGA TCGGCATCGG GTGGCCGCTC GGATGCTTTA TCTCGTTCGT CTTCGCGGTC
GCCATGGCCC AAATCAGTTC CGCCTATCCG ACCGCGGGCG GCCTCTATCA CTGGGGTTCG
ATTCTGGGCA ACCGCTTCAC CGGCTGGCTG ACCGCATGGT TTAACCTGCT CGGTCTGGTC
ACCGTGCTCG GCGCGATCAA CGTCGGCACC TACTACTTCT TCATGGGCTC GTTCGGAACG
CCCTATTTCG GTCTGGAAGA CACGACGGGG ACCCGGATCG TCTTCCTGGC GATCATCACA
GGCGCGCAGG CGCTCGTGAA TCATATGGGC ATCGCGCTTA CGGCGAAGCT CACCGATTTT
TCGGGCTATC TGATCTTCGT CACCGCGATC CTGCTGGCGA TCGTCTGCCT CGCCGTTGCG
GACACTTACG AGATCGGCCG GCTATTCACC TTCTCGAATT ACTCGGGAGA AGCCGGCGGC
AATGTCTGGC CCCAGACCTC GGCTACCTGG GTGTTCCTGC TCGGTTTGCT GCTGCCGATC
TACACGATCA CGGGCTACGA CGCCTCGGCC CATACTTCGG AAGAAACGGT AAAGGCCGCT
CACTCCGTTC CGCGCGGAAT GATCTCGTCG GTGCTCTGGG CCGCGCTCTT CGGCTACATC
ATGCTTTGCG CCTTCGTGTT GATGATCCCT GATATGGACG AGGCAGCGAA ACAGGGCTGG
AACGTGTTCT TCTGGGCGAT GGACGCGCAG GTGAATCCCA TCGTCAGAGA CATCCTCTAC
CTGGCGATCC TGGTCAGCCA GTGGCTTTGC GGTCTGGCGA CGGTAACCTC GGTCTCCCGT
ATGATCTTCG CCTTCTCGCG TGACGGTGGT CTGCCGGCAT CGAAGGCACT CTCGAAGGTG
AGCCCGACCT ATCGCACGCC GGTCGCGGCC ATCTGGACCG GCTCCATTCT CGCGGTGCTT
TTCGTCTGGG GATCGTCGCT GGTCTCGATC GGCGACACGC CCGTTTATAC GATTGTCGTT
TCCTGCACCG TCATCTTCCT CTTCTTCTCC TTTGCGATTC CGATCACGCT AGGTCTGATC
GCCTGGGGAA CCTCGAAGTG GGACAAGATG GGGCCGTGGG ACCTGGGCGA GGGCATGTTC
AAGCTCTTCG CGGTGCTTTC GATCGTTGCC ATGGTGCTGA TCTTCGTTCT CGGCATTCAG
CCGCCGAACG ACTGGGCGCT CTACATCACG GTCGGCTTCC TGATCGTGAC GGGCATCATC
TGGTTCGCCT TTGAAAAGCG ACGGTTCCGT GGACCGCCAA TCGGCGACGA GGTCGCGCGC
CGTCAGGCGG AGATCGCCGC TGCCGAAAGG GCGGTCGGCG AAGCGTAA
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| Protein sequence | MSDYSEIDKK QDLQVLHSMG YAQELERRMS QFSNFAVSFS IICILSGGIN SLAQATSGAG
GAAIGIGWPL GCFISFVFAV AMAQISSAYP TAGGLYHWGS ILGNRFTGWL TAWFNLLGLV
TVLGAINVGT YYFFMGSFGT PYFGLEDTTG TRIVFLAIIT GAQALVNHMG IALTAKLTDF
SGYLIFVTAI LLAIVCLAVA DTYEIGRLFT FSNYSGEAGG NVWPQTSATW VFLLGLLLPI
YTITGYDASA HTSEETVKAA HSVPRGMISS VLWAALFGYI MLCAFVLMIP DMDEAAKQGW
NVFFWAMDAQ VNPIVRDILY LAILVSQWLC GLATVTSVSR MIFAFSRDGG LPASKALSKV
SPTYRTPVAA IWTGSILAVL FVWGSSLVSI GDTPVYTIVV SCTVIFLFFS FAIPITLGLI
AWGTSKWDKM GPWDLGEGMF KLFAVLSIVA MVLIFVLGIQ PPNDWALYIT VGFLIVTGII
WFAFEKRRFR GPPIGDEVAR RQAEIAAAER AVGEA
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