Gene Smed_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2124 
Symbol 
ID5322984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2188394 
End bp2189323 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID640791062 
Producthypothetical protein 
Protein accessionYP_001327792 
Protein GI150397325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.132727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCCA TTGCAACGTT CGCCTACTGG CTCGGTTCCG AGGCTACGAC GATCATGGCT 
CTGCCGCCTG ATTCAGGTTC CGTTTCCGGA GGAGAGATGC GGACGATCTT GAACGTAGCC
GATGCGGCGA GCCACCTTGT ACTCGATCCG TCCTCGGCGC TCGACATCGC GGCCTTCCTC
GTCGACGGCG TCGACCTGTC GCCGCGAGCC GCGATCCCCT CCGACGGTGA TCCGCGCATC
GAACGCGCGC TCGCAGGGTT CCTGTTCACC TGCGGTCCGG ACCATATTCG TCATCCCGAG
CCCGTGGAGG CGCGCCCCGG CGCCTCCTAT CCTCTGCATG GATCACTCGC GGGAACGCCT
GTCAGTCGGG CCGAAATGGG TGGTGCAGGC GATTTTTGTA CGGCTGTCAC CGAAGTCGAC
CTCGCCTGCG GCGGTCGCGC TGCCATCGAG CGGCTCTGGC AAACCGACGC GGCTCAGCGC
GGCGTGACGC TCGCCGACCG GGTGGTCAAC ACCGGCACGT CAGCCTTCGC GCCGATGATG
ATGTATCACA TGAACATCGC CGGCCGGCTG CTCGGCGACG AAACGCGGAT CGAAAGCCCG
TCGCTTGATA GCGGATCGCT TCCCTGGCGC TTCGGGGAGG GCGAAAGCGC GCATTTCTGC
CGTCCGGCCG TTGCCCGCGA GGGGTGGTCG GAGGTGACCC TTGCTGCGAT GCCGGGTCTC
GCCGGAGGCG CATTGTGCGT GCGCTTTCGC ACCGATACGC TGCCGTTCCT CCAGATGTGG
CGCTGTCAAC GCGGCGGCGC CGACGTCGTC AGCATCGAAC CGGCCTCGCA TCGCCTTGCG
AGGCGGCCGG AACTTACAGC AAATGGGGAA TTCGACCTGC TCCAGCCCGG CCAATCGCGC
GGCTTCAGCC TGTCTTTCGC GGTTTCATGA
 
Protein sequence
MLSIATFAYW LGSEATTIMA LPPDSGSVSG GEMRTILNVA DAASHLVLDP SSALDIAAFL 
VDGVDLSPRA AIPSDGDPRI ERALAGFLFT CGPDHIRHPE PVEARPGASY PLHGSLAGTP
VSRAEMGGAG DFCTAVTEVD LACGGRAAIE RLWQTDAAQR GVTLADRVVN TGTSAFAPMM
MYHMNIAGRL LGDETRIESP SLDSGSLPWR FGEGESAHFC RPAVAREGWS EVTLAAMPGL
AGGALCVRFR TDTLPFLQMW RCQRGGADVV SIEPASHRLA RRPELTANGE FDLLQPGQSR
GFSLSFAVS