Gene Smed_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2114 
Symbol 
ID5322974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2176299 
End bp2177243 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content63% 
IMG OID640791052 
Producthypothetical protein 
Protein accessionYP_001327782 
Protein GI150397315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.254514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAC CCGCAAATTC CATCAGCACT CAGATGACGT TGCGTCTCTG GGCACTGCTC 
GCGCTACTCG GCCTCATCTG GGGCGGGTCC TTTTTCTTCG CCCGCGTGGC AGTTGCCCAT
GTGCCGCCGT TCACCCTCGT GTTCATGCGC CTGAGCCTCG CAGCTCTCGC CCTGCATTTC
TATCTTCTCG GGCGCCACGG CATCTACCAG GCGCTTGCAG AACGCTGGCG CGAATTCCTG
CTGATGGGGC TCATCAACAA CGCCATTCCG CATGCTTTCA TTTTTCTCGG CCAGACGCAT
ATAGGTGCCG GTCTCGCTGC CATCCTCAAC GCGACGACGC CGATCTGGAC GGTCGTCATC
GCAAACGTCG CGACCGAGGA CGAAAAGCTC AGCGTCGCCA AGTTCAGCGG TTGCCTGCTC
GGGCTTGCCG GTACCATCGT GCTCATAGGT CCGAGCGCAG CGGCAGGGCT CTTCGGCACG
GCCGGCGACG TGCCGCTCTG GGCACTCGTT CTGCCGGTAC TCGCCGCTGG AAGCTACGGT
CTCTCCGGCA GCTATGGCAA ACGCTTCCGC GATCTGGCAC CGCCGGTGAC CGCCGCAGGT
CAGCTGACCG CATCGACGCT TGTCATGCTG CCGGTCGCCG TGCTCGTCGA TACGCCTTGG
GCCATGCCGA TGCCGCCGCT CACCACAGTG CTCGCCATCC TCGGCTTGGC GCTCGTGTCG
ACCGCCTATG CCTACATCCT GTTCTTCCGG ATCATGGCTG AAGCAGGCGC CACGAACACT
TCGCTGGTAA CGCTGCTGGT GCCGCCAAGC GCCATCCTGC TCGGATATCT CTTTCTGGGA
GAAACGCTGC AGGCGACGGA CCTCGCCGGA ATGCTGCTCA TTGCCGCCGG TCTGGTTGTC
CTTGACGGGC GCATCCTGAG GCTCGGAATT TTCCCGGGAC GGTGA
 
Protein sequence
MASPANSIST QMTLRLWALL ALLGLIWGGS FFFARVAVAH VPPFTLVFMR LSLAALALHF 
YLLGRHGIYQ ALAERWREFL LMGLINNAIP HAFIFLGQTH IGAGLAAILN ATTPIWTVVI
ANVATEDEKL SVAKFSGCLL GLAGTIVLIG PSAAAGLFGT AGDVPLWALV LPVLAAGSYG
LSGSYGKRFR DLAPPVTAAG QLTASTLVML PVAVLVDTPW AMPMPPLTTV LAILGLALVS
TAYAYILFFR IMAEAGATNT SLVTLLVPPS AILLGYLFLG ETLQATDLAG MLLIAAGLVV
LDGRILRLGI FPGR