Gene Smed_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2111 
Symbol 
ID5322971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2173070 
End bp2173744 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID640791049 
Productmethyltransferase type 11 
Protein accessionYP_001327779 
Protein GI150397312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.296971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TGCAGACCGC GGCTGACAGC CATGCGCATC TCATGGACCG GATGTACCGC 
CATCAGCGTT ATATCTATGA CTTCACCCGC AAATACTACC TCTTCGGCCG CGATACCCTG
CTCCGTGAGC TGACCCCGGC GCCCGGTGCC TCCATTCTCG AAGTGGGCTG CGGCACGGGC
CGAAATCTGG CGATGATCGG CGATCTCTAT CCCGGTGTCC GCCTTTTCGG ACTCGATATC
TCGGCGGAAA TGCTGGCGGC CGCCAAAACC AAGCTCCGGC GCCAGGGCCG GCCGGATAGC
TTCCTGCGGG TTGCTGACGC GACCGATTTC ACAGCCGCGT CCTTCGGTCA GAATGGCTTC
GACCGGATCG TGATCTCCTA TGCCCTCTCG ATGGTACCCG ATTGGGAAAG GGCGATCGAT
GCCGCGATCG CCGCGCTAAA CCCGGGAGGC TCGCTGCATA TTGCCGACTT CGGCCAGCAG
GAAGGCTGGC CCGCCGGGTT CCGCCGCTTG CTTCAGGCAT GGCTCGGACG TTTCCATGTC
ACACCGCGCG AATCGCTTTT CGACGTGATG CGCAAAAAAG CCCAGACGAA CGGATCCTCG
CTCGAGGTCA GATCGTTCGG CAGGGGCTAT GCCTGGCTCG TAGTCTATCG CCGGCCCGCA
GCATGCTTCC CCTGA
 
Protein sequence
MSAMQTAADS HAHLMDRMYR HQRYIYDFTR KYYLFGRDTL LRELTPAPGA SILEVGCGTG 
RNLAMIGDLY PGVRLFGLDI SAEMLAAAKT KLRRQGRPDS FLRVADATDF TAASFGQNGF
DRIVISYALS MVPDWERAID AAIAALNPGG SLHIADFGQQ EGWPAGFRRL LQAWLGRFHV
TPRESLFDVM RKKAQTNGSS LEVRSFGRGY AWLVVYRRPA ACFP