| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2103 |
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| Symbol | |
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| ID | 5322963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2164510 |
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| End bp | 2165049 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640791041 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001327771 |
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| Protein GI | 150397304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.29412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAG CGTCTGTTGC TGCGGCGGCG GCATGCCTTG GCATGTTCAT CGCCGGGATG
GGTACGTCGT ATGCAGGGGG CATCGACAAA ACCGTCAAGA CTTCTGCGAT ACCTTCCGTG
ACCCGAACCA CGGGTTATCC AAAACCTGAC CTCGCATTGC CTGGCGGCTC CCAATATACG
ATCCTCATCC AGTCCTATGC CAAGCAATAC GGCGTTCCGG TAGATCTGGC GCACGCTGTC
GTACAGGTCG AGAGCAACTT CAATCCCAAG GCTCGCGGCC GCGCCGGGGA AGTCGGACTG
ATGCAGATCA AGCCGGCCAC GGCCCGGATG ATGGGTTATT CCGGCTCGGT CAAGGAACTC
TTCGATCCTG AGACCAACAT CAAGTTCGGA ATGAAATACC TGGCAAAGGC CAAGGAGCTT
TCGGACGGCT CCACCTGCGG CACCATTCTC AAATACAATG CGGGCCATGG TGCGAAGCGG
ATGAATCCCG TTTCGAAGCG CTATTGCGGC AAGGTCAAGA CTATTCTCGA CTGGTTGTGA
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| Protein sequence | MRIASVAAAA ACLGMFIAGM GTSYAGGIDK TVKTSAIPSV TRTTGYPKPD LALPGGSQYT
ILIQSYAKQY GVPVDLAHAV VQVESNFNPK ARGRAGEVGL MQIKPATARM MGYSGSVKEL
FDPETNIKFG MKYLAKAKEL SDGSTCGTIL KYNAGHGAKR MNPVSKRYCG KVKTILDWL
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