| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2100 |
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| Symbol | |
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| ID | 5322960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2161142 |
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| End bp | 2162272 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791038 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001327768 |
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| Protein GI | 150397301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.197652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA GATTCCTGAA ATGGTCGCGG CACAATCTGT TCGGCAAGCC GTTCGACATT
CTGCTGTCTC TCACCGTCAT ACCCGGCTTT CTCTGGCTGG CCTACCAGGT CGCGGCCTGG
ACGGTTACGA CGGCGCGATG GGAGATCATC CCCGAGAGCC TGCGGATCCT GATGATCGGC
ATTTTCCCGG CCGAGCAGGC ATGGCGCGCC TGGGTCGCGA TCATGATCAT CGCCGCCCTC
CTCGGCGCGG CGCTGGGATG CGTGTTCGCC TTCAGGAAGC GCCACGCGGC TGGCTTGCTC
TTGGTGCTGG CTGCCGTCAT CGCGCTTACG GGTTCAAAAG ACCTGACGAA TGCGCTCCTT
ACCGCCTCGA CCATTGCGAT CTTTGCGAGC GGCTGCGCGG CAATCTCGCT TATCCCCTTG
CTTCGCAGAG CATTGTTGCC GGCTGGCTTC ATTGCGCTGA TCGCAATCTT CGCCGTCATG
TCGCCGCCCG GCGCCGGCCT TTGGGGTGGC CTGCTCCTGA GCATTCTGCT GACGCTCGTG
ACATCGATTG TCTCGCTTCC GGTCGGAATC CTGCTCGCCT TTGGCCGCCG CAGCCGTTTC
TCGAGCATGC GGTGGATCTG TATGGGCTAT ATCGAGGTGA TGCGGTCCGT GCCATTGATC
ATGGTCGTCT ACTGGATCTG GATTCTGATG CCAGTCCTGG CGCCGCAATT CGGCCTCGCG
GACGTCGTGC GCGGCATGAT CGGCTTCACC CTGTTCTATT CCGCCTATGT GGCCGAATAT
GTCCGGAGCG GCCTGCAAGC CGTTCCCCGC GAACAGACCG AGGCGGCCCG CTCGCTCGGC
ATGAGCGAGT TCGACATCAA CCGCTCGATC GTACTGCCGC AGGCCCTTCG CGTGGCGGTG
CCGCCGCTTG TCGGCAATGT GCTCGATATT TTCAATACGG CGCCGCTGGT CTTCATCATC
GGCCTGACGG ATTTTCTGCG CGCCGGTCAG ATGATCCTGG CCAATCCCCA ATATGGCGAC
CGGACCTATG AGGTCTACGC CTTCCTGTTT CTCACCTATT TCCTTGTCGG ATCCCTGATA
ACCTTCGTCG CGCGCAGGCT CGAAACGCAT CTTGCACGAG GCAATCGGTG A
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| Protein sequence | MIARFLKWSR HNLFGKPFDI LLSLTVIPGF LWLAYQVAAW TVTTARWEII PESLRILMIG
IFPAEQAWRA WVAIMIIAAL LGAALGCVFA FRKRHAAGLL LVLAAVIALT GSKDLTNALL
TASTIAIFAS GCAAISLIPL LRRALLPAGF IALIAIFAVM SPPGAGLWGG LLLSILLTLV
TSIVSLPVGI LLAFGRRSRF SSMRWICMGY IEVMRSVPLI MVVYWIWILM PVLAPQFGLA
DVVRGMIGFT LFYSAYVAEY VRSGLQAVPR EQTEAARSLG MSEFDINRSI VLPQALRVAV
PPLVGNVLDI FNTAPLVFII GLTDFLRAGQ MILANPQYGD RTYEVYAFLF LTYFLVGSLI
TFVARRLETH LARGNR
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