| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2098 |
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| Symbol | |
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| ID | 5322958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2158833 |
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| End bp | 2159864 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791036 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327766 |
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| Protein GI | 150397299 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0603168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.126386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA TCAAGCTTCT CACGGCCGGT GTTTTTGCCG GTCTCGCCGT TACCACAGGT
CAGGCGTCTG CCTCCGTCCT CGACACCGTC AAGCAGCGCG GCACACTGAA CTGCGGCACC
GACAACACCG CTCCCGGTTT CGGCTACCTC AATACGACCA CAGGCCAGAT GGAAGGGCTG
GACGTAGACT TCTGCAGGGC GGTTGCAGCG GCGGTCCTCG GCGACGCGTC CAAGGTCAAA
TTCGTCACCG TAACGGACAA AAGCCGCTTC GACGCCGTCC TGACGAACCA GGTGGACGTC
GTCTTCGCAC ACACGACCAT GAAGCCGGCC CGCGAATCCT CGATCGCCAT AGATTTTCTG
CCGGTCAACT TCTATGACGG CACGGGTATC ATGGTGAAGA CGGATTCCGA GGTGGTGCAG
TTCGCCGACC TCGAAGGTGC GACGTTCTGC ACGACTCAGG GTTCCGTGAC CGAAACCGTG
CTTACCAGCG CTTTCAAGGC CAATGGATGG CAGGGCTCCA AGGTTCTCAC CTACGAAAAC
CTCGAAAAGC TGTTCGCCGC GCTCAACTCC GGTCGCTGCA ACGCGATGAG CACAGACAAG
TCCGCGCTTG CGGCCTGGGC CGGCAACTCG CCGAAGCCGT CCGATTATCT CATCCTGCCG
GAAACCCTCG ACAAGTCGCC CTTCGCTGGT TTCGTCGCGG CCAATGATTC CAAATGGCGC
AATGCGCTGC GCTGGATCAC CTACGGCCTG TTCCAGGCGG AGGAGTCCGA CATCACACAG
GCCAATCTCG AAGAAAAGCT GAAGAGCGAC GACCCGTTCG TTCAGAAGTT TCTCGGCGTG
GGAGGCGGCT ACGGCAAGGA CTTCGGCCTT CCGGACGATT TCGTTGCGCA GGCCATAAAG
GCGATGGGCA ATTACGGCGA GATTTACGCC CGCAATCTCG GTCCGGATAC GAGCATGTTC
CTTGACCGGA AAGGTACGCC TAACGCTCTT TGGACAGAGG GCGGCGCGAT CTACTCGCCC
CTCTGGAACT GA
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| Protein sequence | MKLIKLLTAG VFAGLAVTTG QASASVLDTV KQRGTLNCGT DNTAPGFGYL NTTTGQMEGL
DVDFCRAVAA AVLGDASKVK FVTVTDKSRF DAVLTNQVDV VFAHTTMKPA RESSIAIDFL
PVNFYDGTGI MVKTDSEVVQ FADLEGATFC TTQGSVTETV LTSAFKANGW QGSKVLTYEN
LEKLFAALNS GRCNAMSTDK SALAAWAGNS PKPSDYLILP ETLDKSPFAG FVAANDSKWR
NALRWITYGL FQAEESDITQ ANLEEKLKSD DPFVQKFLGV GGGYGKDFGL PDDFVAQAIK
AMGNYGEIYA RNLGPDTSMF LDRKGTPNAL WTEGGAIYSP LWN
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