| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2093 |
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| Symbol | |
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| ID | 5322953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2152980 |
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| End bp | 2154230 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791031 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_001327761 |
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| Protein GI | 150397294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.59754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0350619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA TCGTTCTCGG CGCCGGCATC ATCGGCGTCA CATCGGCCTA TCAGCTCTCC
AGGGCGGGAC ACGAAGTGAC GGTCATCGAT CGTCAGCCGG GCCCGGCACT TGAGACCAGC
TTTGCCAATG CCGGCGAAGT CTCCTTCGGC TATTGTTCCC CTTGGGCTGC GCCCGGCATT
CCGATGAAGG CGCTGAAATG GCTCTTCATG CAGCACGCGC CGCTGATCCT TCGCCCCAGG
ATCGATGCGG CCATGCTCAG CTGGATGGCG AAAATGCTCT CCAATTGCAC CTCCCGGCGT
TATGCGGTCA ACAAGAGCCG CATGCTGCGG CTTGCCGACT ACAGCCGCAC GTCGCTCGCT
GCCCTGCGCG AGGAGACGGC AATCACCTAT GACGAGCGAA TGCAAGGCAC GCTGCAATTG
TTTCGCACCG AGGCGCAGCT CGACGCGTCG GCCAAGGACA TCAGCGCGCT CGCCGCCGAC
GGTATCCCCT ACGAGGTGCT CGACCGCGAC GGCTGCATCC GTGCGGAGCC GGCGCTGGGG
CGCGTGCGCG ACAAGATCGT CGGCGGCCTG CTAACGCCGC AGGACGAAAC CGGCGACTGC
TTCAAATTCG CTAATGCGCT GGCGGGGAGG GCGGAAAAAC TCGGCGTTTG CTTCGATTAC
GGCACGGAGA TCAGGGCGCT GGAAGTCGAT GGCGGCCGGG TGCACGGCGT CGTCACCTCC
AAGGGACGGC GCGCCGCCGA TGCGGTGGTG GTCGCACTCG GCAGCTATTC GCCGCTGCTC
GTGCGGCGCT TCGGCATTCG CCTGCCGGTC TATCCGGTAA AGGGCTACTC GCTGACCATT
CCGATTGCGG ACGCTTCGCG CGCACCGGTA TCGACGGTGA TGGACGAAAC CTACAAGATT
GCCATCACCC GCCTCGGCGA TCGCATCCGC GTCGGAGGCA TGGCCGAGAT CTCCGGCTAT
ACCAACGACC TCGGCATTGC GCGCCGACGC ACGCTGGAAC ATTCGGTCAT GGACCTGTTC
CCGGGCGGCG ATGCCGCGAA GGGCTCCTTC TGGTCCGGGC TGCGTCCGAT GACGCCCGAC
GGCACGCCGG TGATTGGCCC GACCAGGATC GCCGGGCTCT TCCTTAATAC CGGTCACGGC
ACTCTGGGTT GGACGATGAG TTCCGGATCG GCCCGCGTGA TCGCCGATCT CGTCAGCGAC
CGCAAGCTGG AGATCGATGC CACCGATCTC GCCATTGCCA GGTATGGCTA A
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| Protein sequence | MKVIVLGAGI IGVTSAYQLS RAGHEVTVID RQPGPALETS FANAGEVSFG YCSPWAAPGI
PMKALKWLFM QHAPLILRPR IDAAMLSWMA KMLSNCTSRR YAVNKSRMLR LADYSRTSLA
ALREETAITY DERMQGTLQL FRTEAQLDAS AKDISALAAD GIPYEVLDRD GCIRAEPALG
RVRDKIVGGL LTPQDETGDC FKFANALAGR AEKLGVCFDY GTEIRALEVD GGRVHGVVTS
KGRRAADAVV VALGSYSPLL VRRFGIRLPV YPVKGYSLTI PIADASRAPV STVMDETYKI
AITRLGDRIR VGGMAEISGY TNDLGIARRR TLEHSVMDLF PGGDAAKGSF WSGLRPMTPD
GTPVIGPTRI AGLFLNTGHG TLGWTMSSGS ARVIADLVSD RKLEIDATDL AIARYG
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