| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2087 |
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| Symbol | murE |
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| ID | 5322946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2145344 |
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| End bp | 2146804 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791024 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001327755 |
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| Protein GI | 150397288 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.305109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00117525 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATCA GGGACCTGGC GGGATCGAGT TTCCCGGAAC TTTCGGCGCA GCTGAAGGGC
GACGCCGCGA ACATCGAGAT CGGCGGCATT ACGGCCGATA GCCGGCAGGT CAGGCCCGGC
GACCTCTTCG TCGCGGTCGC CGGAGCGAAG GCGGACGGGT CCGCTTACAT AACGGACGCG
CTATCGCGCG GGGCCTCGGC GGTCGTCGCG GGAACCAGCG CCCGGGCAGA GGCTGGCATC
AACGTTTTCA CGATCTCCGA ACCACGCCGT TTCCTGGCGA AGGCGTCGTC GAGCTTTTTC
GGACGCCAGC CCGAGACGAT GGTGGCGGTC ACAGGTACGG CGGGGAAGAC GTCCGTTGCC
TCCTTCACCC GGCAGATCTG GGCGCATTCC GGTTTCTCGG CGGCGATGAT CGGCACCACG
GGCGTCGTAT CACCCGGCCG CGCCGAATAC GGTTCTCTGA CGACACCGGA TCCGGTGTCG
CTGCACAAGC TGCTCGCCGA ACTGGCTGAT GAGGGCGTGA CCCACGCCGC AATGGAGGCG
TCGAGCCACG GCCTGGACCA GCAACGGCTG GACGGCGTCA ATCTCGCTGC CGCCGCCTTT
ACGAATCTCG GCCGCGATCA CATGGACTAC CATCCGACGG TTGAGCATTA CATGGCCTCG
AAGATGCGCC TCTTTGCGGC GTTGCTGCCG AAAGGTTCGC CGGCCGTGAT CTTCGCCGAT
GACCAATGGT CCGCCGATGC GATCGCTGCC GCTCGCAAGG CAGGGCACGA TGTGCGGACC
GTTGGGCGCA ATGGCGATTT CATCGCGCTG AAACGTGTCG AGCATTTCCG CCACAAGCAG
TCGGCGGAGG TTCATGTCGG CGACGACATC TACGAGATAC ACGTGCCGCT CGCCGGTGAC
TTCCAGGTCG CCAATGCACT CGTTGCGGCG GGGCTTGCAA TGTCAACGGG GATTTCCGCG
AAGGCAGCTT TCTCGGCGCT GGAGAGGCTG CAGGGCGCCT CAGGGCGCCT CGAACTCGTC
GGGCAGACGA AGGATGGCGC GCTCGCCTAC GTGGATTACG CCCACAAGCC GGACGCGCTC
TCAAATGTGC TCGAATCCCT GCGTCCTTTT ACCACTGGCC GGGTCGTCGT GGTTTTCGGT
TGCGGCGGCG ACCGGGACAA GGGCAAGCGC CCGATCATGG GAGAGATCGC CAGCCGCCTT
GCCGATGTCG TCATTGTCAC GGACGACAAC CCGCGCTCGG AAGTGCCGGA GGTGATCCGC
GCCGAGATCA TGGCGGCGGC AAAGGGCGCT ACGGAGATTG GCGATCGCGC CGAGGCGATC
CGCGTTGCCG TCGGCATGCT GAAGACCGGC GATACGCTGA TCGTCGCGGG CAAAGGGCAT
GAAGAGGGGC AGACGGTTGG TTCCGTGACG CTGCCTTTCT CCGACCACGC GGAGGTCCGC
AAGGCACTGG GAGGTCTTTG A
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| Protein sequence | MKIRDLAGSS FPELSAQLKG DAANIEIGGI TADSRQVRPG DLFVAVAGAK ADGSAYITDA
LSRGASAVVA GTSARAEAGI NVFTISEPRR FLAKASSSFF GRQPETMVAV TGTAGKTSVA
SFTRQIWAHS GFSAAMIGTT GVVSPGRAEY GSLTTPDPVS LHKLLAELAD EGVTHAAMEA
SSHGLDQQRL DGVNLAAAAF TNLGRDHMDY HPTVEHYMAS KMRLFAALLP KGSPAVIFAD
DQWSADAIAA ARKAGHDVRT VGRNGDFIAL KRVEHFRHKQ SAEVHVGDDI YEIHVPLAGD
FQVANALVAA GLAMSTGISA KAAFSALERL QGASGRLELV GQTKDGALAY VDYAHKPDAL
SNVLESLRPF TTGRVVVVFG CGGDRDKGKR PIMGEIASRL ADVVIVTDDN PRSEVPEVIR
AEIMAAAKGA TEIGDRAEAI RVAVGMLKTG DTLIVAGKGH EEGQTVGSVT LPFSDHAEVR
KALGGL
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