| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2078 |
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| Symbol | |
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| ID | 5322937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2133977 |
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| End bp | 2134663 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640791015 |
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| Product | aquaporin Z |
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| Protein accession | YP_001327746 |
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| Protein GI | 150397279 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.181948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00125413 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGGA AGCTTTCTGT GGAATTTCTC GGTACTTTCT GGCTCGTTCT CGGCGGGTGC
GGCAGCGCCG TGCTTGCCGC GGCCTTCCCG GAGGTCGGTA TCGGCCTGCT TGGCGTCTCC
TTTGCCTTCG GCCTTACGGT GCTGACCATG GCCTATGCGG TTGGCGGAAT TTCCGGCGGC
CATTTCAATC CGGCGGTATC GCTCGGTCTT GCCGTCGTCG GCAGGGTGCC GCCGGCGAGC
CTCGTCGGAT ACATCATCGC GCAGGTTGCC GGGGCGATCG CCGCGGCTGC CGTCCTCTAC
GTGATCGCCA CCGGCAAGGC CGATTTCCAG CTTGGTAGTT TTGCCGCCAA TGGCTACGGC
GAGCACTCTC CGGGCGGCTA CTCGCTGACG GCAGCGCTCG TCACCGAGGT GGTCATGACC
GCCTTTTTCC TGTTCATCAT TCTGGGCTCG ACGCACAGCC GGGTGCCTGT GGGCTTCGCA
CCCATCGCCA TCGGCCTCGG GCTGACGCTG ATTCACCTCG TGTCGATCCC GGTCACCAAC
ACCTCGGTCA ATCCGGCTCG ATCGACCGGG CAGGCGCTGT TCGTCGGCGA TTGGGCGATT
TCACAGCTCT GGCTTTTCTG GGTGGCGCCG CTGATCGGTG CGGTCATTGC CGGAATCGCC
TGGAAGGTCG TCGGCGAGGA AGCCTAG
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| Protein sequence | MFRKLSVEFL GTFWLVLGGC GSAVLAAAFP EVGIGLLGVS FAFGLTVLTM AYAVGGISGG
HFNPAVSLGL AVVGRVPPAS LVGYIIAQVA GAIAAAAVLY VIATGKADFQ LGSFAANGYG
EHSPGGYSLT AALVTEVVMT AFFLFIILGS THSRVPVGFA PIAIGLGLTL IHLVSIPVTN
TSVNPARSTG QALFVGDWAI SQLWLFWVAP LIGAVIAGIA WKVVGEEA
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