| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2077 |
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| Symbol | ddl |
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| ID | 5322936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2132737 |
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| End bp | 2133663 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791014 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001327745 |
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| Protein GI | 150397278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.335568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00112188 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGCA AGCATGTCGC TGTCCTGTTG GGCGGATTTT CCTCGGAGAG GCCGGTGAGC
CTGTCTTCGG GGACGGCTTG CGCGGATGCT CTGGAAGGCG AAGGCTATCG CGTCACGCGC
GTCGATGTCG GTCACGACGT CGCGGCGGTG CTTCAGGAAT TGCGCCCGGA TGTGGTCTTC
AACGCGCTTC ACGGACCATT CGGCGAAGAC GGAACGATTC AGGGAATCCT CGAATATCTC
GAAATTCCCT ATACCCATTC GGGCGTTCTT GCCTCTGCGC TGGCCATGGA CAAGGCCCAG
GCAAAGCATG TCGCCAAGGC CGCCGGTATT CCGGTTGCCG AGGCAGTGGT CATGGACCGC
CGCAGCTTCG GCAATCAGCA TCCGATGAAG CCCCCCTACG TGGTGAAGCC GGTGCGAGAG
GGGTCGAGCT TCGGCGTGGT GATCGTCAAG GAGGATCAGT CGCATCCGCC TCAGGTGATC
ACCTCGAGCG ACTGGCGCTA CGGCGACCGC ATCATGGTCG AGCGCTACGT TGCAGGACGC
GAATTCACCT GCGGCGTCAT GGGCGATGTC GCTCTTGGCG TCACTGAGAT CATTCCGCAG
GGGCATGCCT TCTACGATTA CGACTCTAAA TACGTAAAAG GTGGCTCGAA GCACGTCATA
CCGGCACAGG TTTCACCAAA TATTTACCAA AAAATACAAA CACTGGCTTT GAAGGCGCAT
CAGGCGATCG GTTGCCGCGG CGTCAGCCGG TCCGACTTTC GTTTCGACGA TCGTGGCGAT
GGTGAGGGCG AGTTGATCTG GCTCGAGATC AACACCCAAC CCGGCATGAC CCCAACCTCC
CTGGTGCCCG AAATGGCGCA GCATGCGGGC CTTCGGTTTG GTGAATTTCT CAGGTGGATG
GTGGAGGACG CGTCGTGCTT GCGTTGA
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| Protein sequence | MSSKHVAVLL GGFSSERPVS LSSGTACADA LEGEGYRVTR VDVGHDVAAV LQELRPDVVF
NALHGPFGED GTIQGILEYL EIPYTHSGVL ASALAMDKAQ AKHVAKAAGI PVAEAVVMDR
RSFGNQHPMK PPYVVKPVRE GSSFGVVIVK EDQSHPPQVI TSSDWRYGDR IMVERYVAGR
EFTCGVMGDV ALGVTEIIPQ GHAFYDYDSK YVKGGSKHVI PAQVSPNIYQ KIQTLALKAH
QAIGCRGVSR SDFRFDDRGD GEGELIWLEI NTQPGMTPTS LVPEMAQHAG LRFGEFLRWM
VEDASCLR
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