| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2072 |
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| Symbol | |
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| ID | 5322931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2126104 |
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| End bp | 2126970 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640791009 |
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| Product | hypothetical protein |
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| Protein accession | YP_001327740 |
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| Protein GI | 150397273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000986938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCTTG CAGTTTCTGT CGACATAAGA AAATCAGCGC GTGTCGCCGC GGTCGTTTTA
GCGGCTGTCG CCGGCTCCAG TCTGATCACG GCCTGCCAGA ATGATCCGGA CATCGACATC
ACCAAACTCA CGGCGGAGAC CGACCCGCCG GAGGTGCTCT ACAATCAGGG TCTCGCAAAC
CTGAACGCCG GCAAGACCAC GGAGGCGGCG CGGAAGTTCG AGGCGATCGA CAAGCAGCAC
CCGTTCTCCG AATATGCCCG CAAAGCGCTG GTGATGAATG CCTTCGTTTC TTACCGTAAC
GGCCAGTATC AGGACGCGAT CAACTCGACC AACCGCTACC TGAATCTTTA TCCGCAGTCC
GAAGACGCGG CCTATGCACA ATATATTCAG GGGCTGGCCT ACACCAAGCA GATCCCGTCG
GTGACGCAGG ATCAAAGACC GGCTATGAGG GCAATGGAGG CAATGCAGGT CGTCGTCGAC
AAATATCCGG ATTCCGAATA TGTCGACGAC GCGCAGGCCA AGATCCGTTT TGCACGCGAC
CAGCTCGCCG GCAAGGAAAT GCAGGTCGGC CGTTATTATC TCGAGCGCAA GGAATACCTG
GCCGCGATTT CGCGCTTCCG CACCGTCGTC GAGCGATATC CGACCACAAA TCAGGTCGAG
GAAGCACTCG CCCGTCTCGT CGAAGCCTAT TATGCGATGG GCGTGACCGG GGAAGCTCAG
ACAGCGGCAG CGGTTCTCGG GCATAACTAC CCGGACAGTC AATGGTATGC CGATTCCTAC
AAGCTGCTGC AATCGGGCGG GCTAGAGCCG CGCGAAACCG GCACATCCTG GATCGCGCGC
GCGGGCAAAA ACCTTATCGG CGCGTGA
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| Protein sequence | MVLAVSVDIR KSARVAAVVL AAVAGSSLIT ACQNDPDIDI TKLTAETDPP EVLYNQGLAN
LNAGKTTEAA RKFEAIDKQH PFSEYARKAL VMNAFVSYRN GQYQDAINST NRYLNLYPQS
EDAAYAQYIQ GLAYTKQIPS VTQDQRPAMR AMEAMQVVVD KYPDSEYVDD AQAKIRFARD
QLAGKEMQVG RYYLERKEYL AAISRFRTVV ERYPTTNQVE EALARLVEAY YAMGVTGEAQ
TAAAVLGHNY PDSQWYADSY KLLQSGGLEP RETGTSWIAR AGKNLIGA
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