| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2069 |
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| Symbol | |
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| ID | 5322928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2121042 |
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| End bp | 2122022 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640791006 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001327737 |
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| Protein GI | 150397270 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.18458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00114846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAAAAT TCCTTTTCTG CGAGAATCGA TACGGATTTG TTATGGACCT CTTTAGGCAT
GTCGGCCTTC TGCGCTCATT TTTGATGGTC GCGCGGGAGG GGAATGTGAC GGCGGCGGCT
GAAAAACTCG GCATCAGTCA GCCCGCGCTG ACGCGGAGCA TTCGCCGCCT GGAAGACGAA
ACGGGCTTTC GCCTTTTTGA TCGGCATACG AGAGGGGTCA CACCCACGAT CTATGGGAAG
GCGCTGCTCC GCCACGCCCA GTTGATCGAT ACGGAATGCC GCTTCGCATC TTCAGAACTG
GAGGCCCTTC GTTCCGGGCA TAGAGGGCAG ATAAAAATCG GAGGCGGCCC TTTCTGGGGT
GCCGCCCTGC TGCCGAGGGC TGTCGCGCGA TTGCATTCGC TTCTGCCCAA GCTACAGGTG
AACTTGCAGA TCGGCGTCAA CAACGTGCTT CATCCGAAAC TGCTGGATGG AGAACTGGAC
CTGGTGGTAT CTGCAGCCCC CCGCGATCTA TCGCAATTTC CGGAGCATTT CCGCTTTACT
CGGATCACGA CCATACGGAG CCAGATGTTT GTCCGTGAAG GGCACCCCAT TCTCGCACAA
GAACGGATCC GCTACGAGGA TTTGGCAAAT TATCCATGGA TCATGTATCA GCAGGATCCG
GAGATAATCG AGCGGGTCGC GACACTCCTC AAAGACCTCG GGGTCAACCC GCCTCGGATC
GCCATCAAGG CAAGCTCACT GATGGCCGTA TTGGAGCTTC TCAGATCAGG AGACTTCTTG
GCCTGTTTGG CGGCGCCCAT CCTTGGCGTC GTCCAGGACG TCGGAATCCG CCCCGTCCCC
ATCGACCGCG AAATTTGGAG CTTCCCCGCT GGCATTACTT ACCATCGTGC AATCGAGCAA
TCCACGCCGT TTGAGCTGCT CAGACAGATG TTGACCGACG AGGTCACGAA ACTCGGGCTC
GACCGGACCG AACAAAGATA A
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| Protein sequence | MLKFLFCENR YGFVMDLFRH VGLLRSFLMV AREGNVTAAA EKLGISQPAL TRSIRRLEDE
TGFRLFDRHT RGVTPTIYGK ALLRHAQLID TECRFASSEL EALRSGHRGQ IKIGGGPFWG
AALLPRAVAR LHSLLPKLQV NLQIGVNNVL HPKLLDGELD LVVSAAPRDL SQFPEHFRFT
RITTIRSQMF VREGHPILAQ ERIRYEDLAN YPWIMYQQDP EIIERVATLL KDLGVNPPRI
AIKASSLMAV LELLRSGDFL ACLAAPILGV VQDVGIRPVP IDREIWSFPA GITYHRAIEQ
STPFELLRQM LTDEVTKLGL DRTEQR
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