| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2064 |
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| Symbol | |
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| ID | 5322923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2114764 |
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| End bp | 2116113 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791001 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001327732 |
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| Protein GI | 150397265 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0548204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGC CAATAATTTC TTCGCCCAGA CCGCACTTGA GCAGACGGCA GGTCTTGCAG
GGCGTGGCGG CCGCGGCCGG TGCCGGATTG GCGGGATTTC CCGGACAGCT CGGCGCAGCA
AGTCAGGTCA AGGAACTGAT CGTTCTAACC GGAACCACCC CATGGCTCCC GGCTTACCAG
AAGGCCGCAG CAGCCTACGA GGCGGAGAAG GGCATCAAGA TCACGTTCCG CGCATTTCCC
TATGGCGGAA TGCGTACCCA GATGACCAAC GCAATTCAGA GCAAGAACGC GGCCTTCGAC
GTCTTCCAGC TCGACGAACC CTGGACCGGC CAGTTCTACG ACAACGGATG GGTCAAACCG
CTCGAGGAGA TTATCGAGGG CTACAAGCTC GACCCGAACA TTCTGACCTA TGACAGCCTT
CCCCTCTGGG ACAAACAGCA GAGGCGCGGC AAAGCCGGCG GGAAGATCAT GGGCCTGCCG
ATAAACGGCA ACGTCGATCT ATTCGTCTAC CGAAAGGACA TCTATGAGAA GCTGGGTCTG
ACGGTTCCGA AGACCTGGGA TGAGGCGATC GAAAACGGCA AGAAGGCCGT CGAAGCAGGC
GAAGTCCGAT ATGGTTATGT CACCCGTGGC CAACCCACGG CCGGCGGGCA ATCGGTCAGC
TTCGAGTTCA TGCACGTGCT TTACGGCTTC GGCGGCGATT GGTTCAAGGC CGACGGCGCT
ACACTCGTCC CGACAATCAA CAATGACGCT GCAAAGACCG CGGCAGCGAC TTTCCGCCGG
CTTCTTGAGC TTGGGCCCTC ACGGTCTCAA ACGGTCGGTC AGGCGGACTG CATCGCCCTG
ATGCAGAGCG GCCAGGCTCT GCAGGGTCAC TTCGTTGCTG CCGGCATGCC CCAGCTCGAA
GACGAGACCC GTTCATCGGT CGTCGGCAAA TGCGGCTACA CCATCGTTCT GGCAGGATCA
CTCGACCATC CCGTTCCGGC AAGTGGTGTC TGGTCGCTTT GCGTCCCGGC GGATCAGGCG
CCCGAACGGC AGCTCGCGGC AGCCGAGTTC ATTATGTGGA TGCTGGACAA GAAGCAGCAG
GAAGCCTTTG CAGGCGCTGG CGGGATGCCG ACCCGCAAAG ACGTCGACGT GTCCGGAGCA
GGCGCATTGC GACCGATCAT GGAAGCCGCC AGGGATTCGG CGGCCCTCAC GCAGGGCGCC
ATCCGCTATG TCTTCGCAGC CCAGATGCTT GAAGCCGTCG AACCGGTCAT CGGTCAGATC
GGCTCCGGTG ACCTGGCCGT CGACGAAGGA CTGGACGAAC TGCAAGCGAA ACTCGCGGAG
ATCGCCAAGG CGAGCGGCTT CGCGAAATAG
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| Protein sequence | MIKPIISSPR PHLSRRQVLQ GVAAAAGAGL AGFPGQLGAA SQVKELIVLT GTTPWLPAYQ
KAAAAYEAEK GIKITFRAFP YGGMRTQMTN AIQSKNAAFD VFQLDEPWTG QFYDNGWVKP
LEEIIEGYKL DPNILTYDSL PLWDKQQRRG KAGGKIMGLP INGNVDLFVY RKDIYEKLGL
TVPKTWDEAI ENGKKAVEAG EVRYGYVTRG QPTAGGQSVS FEFMHVLYGF GGDWFKADGA
TLVPTINNDA AKTAAATFRR LLELGPSRSQ TVGQADCIAL MQSGQALQGH FVAAGMPQLE
DETRSSVVGK CGYTIVLAGS LDHPVPASGV WSLCVPADQA PERQLAAAEF IMWMLDKKQQ
EAFAGAGGMP TRKDVDVSGA GALRPIMEAA RDSAALTQGA IRYVFAAQML EAVEPVIGQI
GSGDLAVDEG LDELQAKLAE IAKASGFAK
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