Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2057 |
Symbol | |
ID | 5322916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2108947 |
End bp | 2109255 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790994 |
Product | branched-chain amino acid transport |
Protein accession | YP_001327725 |
Protein GI | 150397258 |
COG category | [S] Function unknown |
COG ID | [COG4541] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.960504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0625464 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCGC AACATCTCGA TCTTCTCTAT CTCATCGTCG CGGCGGCGGT CGCCACCTAT GTCACGCGCT TCGGCGGCTA TGTCCTGATC ACGCAGCTCA AGAACATCCC CCCGCGGATC GAGTCTGCAT TGAACGCAGT CCCGGCGGCC GTATTGACAA CCCTGGTCGC GCCGGCCTTC GTCTATGGGG GCATGGATGT CGCCGCAGCG ATGCTCGTCG CCTTCGTCAT CGGGCTGCGC TTCTCGACCC TTCGGATGCT CCTCGTCGGC TGGATCACGG TCATGATGAT CCGGCACCTG ATCATGTAG
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Protein sequence | MDAQHLDLLY LIVAAAVATY VTRFGGYVLI TQLKNIPPRI ESALNAVPAA VLTTLVAPAF VYGGMDVAAA MLVAFVIGLR FSTLRMLLVG WITVMMIRHL IM
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