Gene Smed_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2057 
Symbol 
ID5322916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2108947 
End bp2109255 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content62% 
IMG OID640790994 
Productbranched-chain amino acid transport 
Protein accessionYP_001327725 
Protein GI150397258 
COG category[S] Function unknown 
COG ID[COG4541] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.960504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0625464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCGC AACATCTCGA TCTTCTCTAT CTCATCGTCG CGGCGGCGGT CGCCACCTAT 
GTCACGCGCT TCGGCGGCTA TGTCCTGATC ACGCAGCTCA AGAACATCCC CCCGCGGATC
GAGTCTGCAT TGAACGCAGT CCCGGCGGCC GTATTGACAA CCCTGGTCGC GCCGGCCTTC
GTCTATGGGG GCATGGATGT CGCCGCAGCG ATGCTCGTCG CCTTCGTCAT CGGGCTGCGC
TTCTCGACCC TTCGGATGCT CCTCGTCGGC TGGATCACGG TCATGATGAT CCGGCACCTG
ATCATGTAG
 
Protein sequence
MDAQHLDLLY LIVAAAVATY VTRFGGYVLI TQLKNIPPRI ESALNAVPAA VLTTLVAPAF 
VYGGMDVAAA MLVAFVIGLR FSTLRMLLVG WITVMMIRHL IM