Gene Smed_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2047 
Symbol 
ID5322906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2099167 
End bp2099664 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID640790984 
ProductCreA family protein 
Protein accessionYP_001327715 
Protein GI150397248 
COG category[S] Function unknown 
COG ID[COG3045] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.847323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.359349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTC GCATCCGTGC CTTGCTTTTC GCCGGCCTCA CCCTCTCGGT CGCATCGGTT 
CCGGCGCTTC ATGCCCAAAC TGTCGGTGAG GTAGGGGTCG ACTGGCTTGG CAACGACATC
AAGATCGACG CGGTAAGCGA CCCGAAGGTC AGCGGGGTTA CGTGTCACGT CACCTATTTC
GATCGCAGCG TCATCGACCG CCTGAAGAAC GGCAACTGGT TCGAGGATCC ATCGAACAAC
TCCATCTCCT GCCGCCAGAC CGGACCGATA ACCATCGACA CCATCGAACT GTCTGAAGAG
GGAGAGGAAG TCTTCCGTTC CGGCCTGTCC CTCATTTGGA AGAACCTGCT TGTGACGCGC
ATCTACGACA GGGCCAACGA CACGCTGATC TATCTGGCGC ATTCCCGGCA GTTGACTGAC
GGATCGGCTA AAATGTCGAT CACGACGGTT CCACTCTATG GTGAACAGGT CACCTGGAAG
AACGGGCGCC CGAAATAA
 
Protein sequence
MLRRIRALLF AGLTLSVASV PALHAQTVGE VGVDWLGNDI KIDAVSDPKV SGVTCHVTYF 
DRSVIDRLKN GNWFEDPSNN SISCRQTGPI TIDTIELSEE GEEVFRSGLS LIWKNLLVTR
IYDRANDTLI YLAHSRQLTD GSAKMSITTV PLYGEQVTWK NGRPK