Gene Smed_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2040 
Symbol 
ID5322899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2092186 
End bp2093262 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID640790977 
Producthypothetical protein 
Protein accessionYP_001327708 
Protein GI150397241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.448037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.676068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGT TTGTCACGGA AGGCATTACG GTTCTGTTCG ATCCGGTATG CGGCGTCGTC 
GACGAGGTCG TTATCGCCTG CGAAGGCGGT GAGTATCTGC GTCCGCTGCA TAAGGCGCCC
TGGACCCGCG CGGGCGAGCG GCTCCCCTCA TCGGTACCGG CGGTCGAGCA AAGGCTGGCG
GGCGATTTCT TCTGCGCGCC CTTCGCCAAG GCGCGGCCGG ACCTCCCGCT GCACGGATGG
GCTGCGAACG GGGATTGGCA GCGAGTGAAG GCGCCCTCGA ACATGCGGGG GATGCAAACC
GCGATCTATC AGCTTCGGCA GAAGGTCGAG GGGGCAGCCT TGACCAAGGA GATCCGTCTT
CGGCCCGGTC ACCCCTTCGT ATATCAGACC CATACCTTCA CCGGCGGCGC GGGCGAGATT
CCGATCGCCC ACCACGCGAT GCTGCATGTG CCTGGCGGTG TGCGGCTGAG TTTTTCGCCG
AAATCAAACG GCAGGACTGG TCCCACTCCA CCGGAGACGG AGCCGGTCAG AGGCCGCTCG
ATCCTGGCCT ATCCGCAGAC GTTCGGATCA CTCGCGTCTC TGCGCCGGGC CGATGGCGCA
ATCATCGACG GGAGCTTCTA TCCTTTCGAT CGAAACCACG AAGACGTCGT GGTTCTCTCC
GAGAGCCCGA CCGCGCCGAT CGGGTGGTCG GCCGCCGTGG CGAACAAGGA CGGGTTTATC
TTCCTGGGCC TCAAGGATGC AAGCCTGCTG CCCCAGACTG TGCTCTGGAT GAGCAATGGA
GGGCGCTACT ACCCGCCGTG GGACGGCAGG CACACTGCCG TTATCGGCAT CGAAGAGGCG
GCGGTTGATT TCCACCTAGC GGATGACGGC AAGGATGGAG AAAGTGTCCG CACCGCGCTC
ACCCTCGCTC CTGATACGGT TACCCGGATC CGCTATGCCT TCGGGGCATT TCCCGTACCG
CAGGGTTGGA GCCGCGTTTC CGACGTCGCC GTTTCAGACA ACCATGTCCT CGTTACGGAC
GCTAGCGGCG ACGCCCGAAC GCTCCCATTC GATGGGCGCT TCCTTCTTCC GGGCTAG
 
Protein sequence
MDRFVTEGIT VLFDPVCGVV DEVVIACEGG EYLRPLHKAP WTRAGERLPS SVPAVEQRLA 
GDFFCAPFAK ARPDLPLHGW AANGDWQRVK APSNMRGMQT AIYQLRQKVE GAALTKEIRL
RPGHPFVYQT HTFTGGAGEI PIAHHAMLHV PGGVRLSFSP KSNGRTGPTP PETEPVRGRS
ILAYPQTFGS LASLRRADGA IIDGSFYPFD RNHEDVVVLS ESPTAPIGWS AAVANKDGFI
FLGLKDASLL PQTVLWMSNG GRYYPPWDGR HTAVIGIEEA AVDFHLADDG KDGESVRTAL
TLAPDTVTRI RYAFGAFPVP QGWSRVSDVA VSDNHVLVTD ASGDARTLPF DGRFLLPG