| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2017 |
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| Symbol | |
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| ID | 5322876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2066944 |
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| End bp | 2067876 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640790954 |
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| Product | HflC protein |
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| Protein accession | YP_001327685 |
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| Protein GI | 150397218 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA ATCGCAGCTC CATTATCCTG ATCGTCCTCG CCGCTGTCCT GTTCGTCGTC
TACTCCTCGG TCTTCGTGGT GAACGAGCGT CAGCAGGCGA TCGTCGTGCG CTTCGGTCAG
ATCCGTGAGG TGAAGAGCGA ACCGGGCCTT TATTTCAAGC TTCCGTTCGG CTTCATGGAT
GCCGACCGTG TTCAGTACGT CGAAGACCAG GCACTCCGTT TCGATCTCGA CAATATCCGA
GTGCAGGTTT CCGGAGGCAA GTTCTATGAG GTGGACGCAT TCGTCGTCTA CAAGATCTCC
GATCCTCGCC GCTTCCGCCA GACGGTTTCC GGCGACCGGG AATCCGCGGA GTCGCGGCTC
AGGACTCGCC TGGATGCGTC CCTGCGCCGG GTTTATGGTC TCAGGGGCTT CGAGGCAGCG
CTTTCGGACG AACGCGCGTC GATGATGCGG GAGGTCCGGA CCGACCTCAG CGCCGATGCG
GAATCGCTTG GCCTCAACAT CGAGGACGTG CGCATCCGCC GTACGGATCT GACCCAGGAA
GTCTCGCAAC AGACCTTTGA TCGGATGAAG GCGGAGCGTC TGGCCGAAGC CGAACTGATC
CGTGCCCGCG GTAACGAGGA AGGCCAGAGA CGCCGTGCAA TTGCCGACCG CCAGGTGGTC
GAAATCGTCG CCGAAGCACA ACGTGATTCG GAAATTCTGC GCGGTGAGGG CGAAGCGGAG
CGGACGCAGA TCTTTGCCGA CGCATTCCAG CGTGATCCCG GCTTTTTCGA GTTCTACCGG
TCGATGGCGG CTTATTCGCA ATCGATCGGC AGCCCGGATA CAACCATCGT GCTTTCGCCG
CACTCGGAAT TCTTCCGTTA TTTCAACAGT GCCGACGGTG CGGACCAGCC GCTGCCGACC
CCGGGACCGG CGGCACCGAC CACCACAGAT TAA
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| Protein sequence | MINNRSSIIL IVLAAVLFVV YSSVFVVNER QQAIVVRFGQ IREVKSEPGL YFKLPFGFMD
ADRVQYVEDQ ALRFDLDNIR VQVSGGKFYE VDAFVVYKIS DPRRFRQTVS GDRESAESRL
RTRLDASLRR VYGLRGFEAA LSDERASMMR EVRTDLSADA ESLGLNIEDV RIRRTDLTQE
VSQQTFDRMK AERLAEAELI RARGNEEGQR RRAIADRQVV EIVAEAQRDS EILRGEGEAE
RTQIFADAFQ RDPGFFEFYR SMAAYSQSIG SPDTTIVLSP HSEFFRYFNS ADGADQPLPT
PGPAAPTTTD
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