Gene Smed_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2007 
SymbolilvH 
ID5322866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2056900 
End bp2057472 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID640790944 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_001327675 
Protein GI150397208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.554097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC ATCTTCAGCC TACGGGCTCG GCCTACTTCA TCGCCAAGGA AACCGAGCTT 
GCGGAAACGC ACACGCTATC CGTTCTGGTC GATAACGAGC CGGGCGTGCT TGCCCGTGTC
ATCGGCCTCT TCTCCGGCCG CGGCTACAAT ATCGAGAGTC TGACGGTCTC CGAAACGGAG
CACGAGGCGC ATCTTTCGCG GATCACGATC GTGACCCGCG GCACGCCGCA CGTGCTCGAG
CAGATCAAGA ACCAGCTCGA AAGGCTCGTT CCGGTGCATC GGGTGGTCGA TCTCACGGTG
CGCGCTGCCG GCCTCGGTCA CGAGCGACCG ATCGAGCGAG AACTGGCGCT CGTCAAGGTC
CATGGCTCGG GCGAACATCG GGTCGAGGCG CTGAGACTTG CCGATGCATT CCGCGCATCG
GTCATCGACG CCAATATCGA TCACTTCGTC TTCGAGATCA CGGGCAAGCC TTCGAAGATC
GAGCAGTTCA TCGCCATCAT GAAACCGCTG GGGCTGATCG AAGTCTGCCG CACCGGTATC
GCTGCAATGA ACCGCGGCCC GCAGGGGATG TGA
 
Protein sequence
MNAHLQPTGS AYFIAKETEL AETHTLSVLV DNEPGVLARV IGLFSGRGYN IESLTVSETE 
HEAHLSRITI VTRGTPHVLE QIKNQLERLV PVHRVVDLTV RAAGLGHERP IERELALVKV
HGSGEHRVEA LRLADAFRAS VIDANIDHFV FEITGKPSKI EQFIAIMKPL GLIEVCRTGI
AAMNRGPQGM