Gene Smed_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1996 
Symbol 
ID5322855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2049948 
End bp2050322 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID640790934 
Producthypothetical protein 
Protein accessionYP_001327665 
Protein GI150397198 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.500109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGC TTTCACTGAC CGTCGCCATC TCGCTTGCCG CGGCCGTCGC CGCCTTTGCC 
GCTCCGCCGG TGAAAACGGT CGAGTCGGAG AAAGGACCCG TGCTCGCCGC TGAAAACGGA
ATGACGCTCT ACACCTTCAA AAACGACAAG AAGGGCGTCT CGGCCTGCTA TGATGCCTGC
GCGACGAATT GGCCGCCATT CACGGTGGAA GGCGATGCCC CAGCCGAGGG CGCCTTCTCG
ATCGTCGAAA GGAAGGATGG CTCCAAGCAG TGGGCGAAGG ATGGAATGCC GCTTTATTTC
TGGGTGAAGG ACAAGAAGAT GGGCGATGCG ACCGGCGACG GCGTGAAGGG CGTATGGGAT
GCCGCACGGC CGTGA
 
Protein sequence
MRTLSLTVAI SLAAAVAAFA APPVKTVESE KGPVLAAENG MTLYTFKNDK KGVSACYDAC 
ATNWPPFTVE GDAPAEGAFS IVERKDGSKQ WAKDGMPLYF WVKDKKMGDA TGDGVKGVWD
AARP