| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_1995 |
|---|
| Symbol | |
|---|
| ID | 5322854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 2048687 |
|---|
| End bp | 2049775 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640790933 |
|---|
| Product | putative ammonia monooxygenase |
|---|
| Protein accession | YP_001327664 |
|---|
| Protein GI | 150397197 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3180] Putative ammonia monooxygenase |
|---|
| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.212349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCCGG AACAGCCCTC AACCCCGACG CTGCCCAGGA ACGGCGGACT GGGACGCCTG
TCCCCCCTTT GGCAATGGGG CCTGCTTGCC CTGCTCTCCG CCGTCTTCGC CGGGATACTC
GAAATGATCG GTATTCCCGC CGGCCTGTTG ATGGGGCCGA TGATCGCGGG TGCGGTCATC
GGCATGAATG GCGGCACGAT ACGATTGCCG CGACAGCTCT TCTTCTGCGT CCAGGTGATA
CTGGCCATGA TGATCGCAGC CTCCATGAGC CCCGATCTTC TCGCGACCTT TTCCGGCCAT
TGGCCCCTCT TCCTTGGAAT CGTTCTCTCA GTGATCGGCG TCAGCACACT CTGCGGCTGG
ACGATCACGC GCATGGGCAT TCTGCCGGGC ACGACCGCGA TCTGGGGCTC GTCGGCGGGC
GCGGCCTCGA CCATGCTCCT GATGGCCGAT GCCTATGGTG CGGATGCCCG GCTCGTCGCT
TTCATGCAAT ATCTGCGCGT CGTCTTCGTC GCCGGAACTG CCACGATCGT TTCCCATCTT
TGGGTGAGCG GTGCCGAGGC GCCGACGGCA GTCCGCTGGT TTGCCCCCAT AGCGGGCGTT
CCCTTCTTCA TGACCCTCGC CATCGGCATC ATCGGCGGCT TTCTCGGCAA AATGCTGCGC
GTCCCCGCCG GCGCCTTTCT CGTGCCTTTC GCAATCGGTT CGGCCCTCAA CATCACTGGA
ACGCTGACGA TCGAACTGCC GCAATGGCTT CTGGCGCTCT CTTTCGCAAT GCTCGGCTGG
AATATCGGCC TTGGCTTTAC GCGGTCAATT CTTGCGCACG CCCGTCGCGC CCTGCTGCCG
ACGATCGTCT CCATTCTCGT GCTTATATCC TTTTCCGGTC TTCTCGCGCT GTTGCTCATC
GAGGCCGCCG GCATCGATCC GCTGACCGCC TATCTCGCGA CCAGCCCCGG CGGGCTCGAT
TCCATTGCCG TGATCGCCGC ATCGAGCAAT GTCGACCTTC CTTTCGTGAT GGCCTTGCAG
ACGGCCCGCC TGCTCATCAT CACGCTGATC GGCCCCGCCC TCGCCCGCTT CGTCGCCGAC
CGGGCGTGA
|
|---|
| Protein sequence | MKPEQPSTPT LPRNGGLGRL SPLWQWGLLA LLSAVFAGIL EMIGIPAGLL MGPMIAGAVI
GMNGGTIRLP RQLFFCVQVI LAMMIAASMS PDLLATFSGH WPLFLGIVLS VIGVSTLCGW
TITRMGILPG TTAIWGSSAG AASTMLLMAD AYGADARLVA FMQYLRVVFV AGTATIVSHL
WVSGAEAPTA VRWFAPIAGV PFFMTLAIGI IGGFLGKMLR VPAGAFLVPF AIGSALNITG
TLTIELPQWL LALSFAMLGW NIGLGFTRSI LAHARRALLP TIVSILVLIS FSGLLALLLI
EAAGIDPLTA YLATSPGGLD SIAVIAASSN VDLPFVMALQ TARLLIITLI GPALARFVAD
RA
|
|---|
| |