Gene Smed_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1985 
Symbol 
ID5322844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2037285 
End bp2037527 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content69% 
IMG OID640790923 
Product17 kDa surface antigen 
Protein accessionYP_001327654 
Protein GI150397187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.414925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATT GCACGATCAC GCTTACCCTC GCAGGCTGCC TTGCCTTGTC CGGCTGCCAA 
TCCGCCTCGA TGACCGGCGG ACGGCCCGGT GAGTTCGGCT GCATCGCGGG CACCGTCGGT
GGGGCGGTCG TGGGTGGCCT GGCCGGCGCG ACCATCGGCT CGGGAACGGG CCAGCTATGG
GCTGTAGGTG GCGGCGCCGT GCTCGGCAGC GCTGCGGGCA GTGCCTTGAC CTGCACCCGA
TAA
 
Protein sequence
MKNCTITLTL AGCLALSGCQ SASMTGGRPG EFGCIAGTVG GAVVGGLAGA TIGSGTGQLW 
AVGGGAVLGS AAGSALTCTR